Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241739g00009 ATGCCCGCTCCTGATGTGCTGCTGCCGTTCTTGGAGGAGGCCGGGATGTTGCGTACCACCTGGGTCTCCGTACTGATGGGGATCCAGTGGGAGGGTGCTTGCGGGATTTTGGTACCCATCATGAGCAGCAGCCATGGGACATGTTGCGCAGTTGGTAAGCCACTCGTCTCAAAGGTTCCACAGTCGTTTTTCTTCTTTTCATCTTCGAAATCTCTTTGCTGCGGTGGTGCTGGTGGACGCTGCGAATGCTTTGCTGATCCATCTCTTTGCCTTATTTGTCAATTGAAGTTGGCTTTGAAAATGGGAGTAGAAAAAGAGGGGACAAAAAGTGAGGGTGGCTATGTTGGTGGTCTTTTCCGGTTATTCGACTGGACCTCGAAATCGCGTAAGAAGTTATTTGCAAACAAGTCAGATTTGCCAGGATCTTTGAAACAGAGAAGAAAAATTGATGGCAACTTGTCAATGATGCAGCCCTATCTGGTGGGGGCTGATGAAGATGAAATTGGAGTAGGAGCAAGTATTAGAAGTAGTGATCACAGTTATGCTTCATCAGTTACAGATGACGATGCGTGCGGAGCAAGGGCGCCTAGTGTGGTTGCTAGGCTTATGGGATTGGATTCCTTGCCCTCTTCCAGTTTTCATGATCCATATTCTTCCCCTTATTTTGATAGCCGATCTTTTCAAGATTTGCAGTACTGGAGGACTAATCTCAATCATCAGCATGGCCATCAGAACCTGTATTCTGGGAAGTTGGTTGAGGGCTCTTCTAGAAACTTCATTGAGCCAAAGCCTCAGAACAACCTTAACAGGCCAATTGAGAAGTTTCAAAGTGAAGTAATGCCTCCCAAAGCGGCAAAAACAATTCCTGTCACACACCATAAACTTTTGTCCCCTATTAAGAGTCCTGGCTTTATTCCAACAAATAATGCAGCTTATATAATGGAGGCTGCTGCAAGAATTATTGAGCCTAGTCCCCAAGCTACTACAAAGGCTAGAGCACACCTTGCAGCAACATCATCAGTATCATTGAGAGTTAGAGATCATAAAGAAAAAGCGGAGGCTTCGCAGAAAGGTCCTCTAGTTGGGTCATCTTCAATGCCCCCTAGAATTAGAGATCTAAAAGAAAAAGGAGAAATTTCTAATAGAAGTAGCAGGATTTCTGAACTTTCTCAAAGGCCAGCTGAATCTAATTCTTCCAAGTATCTAAAGAGGCAATCTCTGAACAAAAGCTGGAATGGATCCGTGGATGCTCCCACTCGATCTTCTACCGAAGCAAAAGAAGATTCTTCTGTGAAGAATGCAGGGAAGTCTATTTCCCTTGCCATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGCTTGAATTCAGGTGGTGGAAGAAGTTTGGTGGATCAGAAAGAAGATTCTGACACTAAAACACACCAGCCTCTAAGGGCAAATGTTCAGAAAAGCTTGCATAAGAAACCCTCTGGTCAGAACGCTTCTGGTGTTCTCAAGCCAAATAGTCTGAAACAAAACCATTCAATTGAGAAAGACAAACAACCATCAAAGCAAGTAGTTTCAACTCCACACAGAAAATCTCTGACCGGGGACTCTGGGCGTCATAGAAGCTCTAGTAGTAAAACACCAGCAAAATCTAAAGTCAGTTCCAAAAAATCGGCCACACAGCTGACAGATAGTGAAAAGGAAGTTTTGTATACCCACACAAACAATTTCCCAAGAAAAAAGAGGTCCACAGATAGAAACTGGAATGATAGGGTTGTTGATAATTTGTTCATTGATAAAAATCATAGGCCTGTTCAGTCTAGTCTAGTAAGTAATAAGCGCCACAGTGATGAAGAAGTAAAAAAGAAAGACATGGATGTAGTTTCCTTTACCTTCACCACGCCGTTGGCTAGAAACAATTCTGGTTTCGAGGCATCTGGACAAGCTGTCCGGAAGACTGGAGGACTTCCCTTTGATCATCACATCAAAAGAATGCTGCTTGACACAGACAGTACAAGGTCTCCCATTGGATACAATGTGATTGGTGGTGATGCATTAGGCATTCTTTTGGAACAGAAGTTGAGGGAATTGACAAATGGACTTGAGTCCTCTTGTGATGACTCTTCTAAAGGGAGGCCATCTTCTAGTACTGGACCAAAATCAAAAGATTTGGCGCCCATGTCTGATTCAGTTAACTTCGTTCCACAGTTGCAACTGAAGAGAGACCAGGACCTGCTATGGGCTGATAAGATGGAAGAGTGCAAGAGCAATCTTGTAGAAACACAGTCATTCAATTGTCGATTGCCAAGTCCAATATCTGTTCTTGAGCCTTCTTTTTCAGCAGAAACCTTTGAATCTTCATTCAGCACCGATGCTGCTAGTACAGAAGGTAGCAAATTGAGCTCATCTGCTCTAGCACAGGAAGTTCATGGTTTGAATTTCTCAAGGAAGTTCTATTCTGCAGAAGCTGATACAGAGTTGTGTGATTCAGCTTGTTCAACATCAACCGGGACCATGACGGTAAATAAGGAGCACACAAGTACAAGTACATTATCAAGCACATGGGAATTGGATTATGTAAAAGAGATCTTATGCAATGTTGAACTAATGTACATGGACTTTGCTGCCGGCCGAACTCACAAAATTGTAAACCCTCATCTATTCAACCAGTTGGAAAGCCATAGGGAAGCAGAGTATGAGAGTGATGGTGGAGAATGTAGGATAAGGAGGAAAGTGATATTTGATTGTGTGAGTGAATGTTTGGACTTAAGATGCAGGCGTTGTGTTAATGGTGGATATGAAATGTGGGGCAAAGGGATTGAAATGGTGAGAAGAAATGAATGGTTGGCAAAGGAAGTGTACAAGGAAATTTCAAGTTGGAGAGGGATGGGAGATTCCATGGTGGATGAGCTTGTGGACAAGGATATGAGCCACCAGTATGGAAGATGGCTAGATTTTGAGGTTGATGCATTTGAACTTGGTGCAGAGGTTGAGGATCAGATACTGAATTCCTTGCTTGATGATGTTGTTGCTGATATCTTGCAATAA 3033 0.4316 MPAPDVLLPFLEEAGMLRTTWVSVLMGIQWEGACGILVPIMSSSHGTCCAVGKPLVSKVPQSFFFFSSSKSLCCGGAGGRCECFADPSLCLICQLKLALKMGVEKEGTKSEGGYVGGLFRLFDWTSKSRKKLFANKSDLPGSLKQRRKIDGNLSMMQPYLVGADEDEIGVGASIRSSDHSYASSVTDDDACGARAPSVVARLMGLDSLPSSSFHDPYSSPYFDSRSFQDLQYWRTNLNHQHGHQNLYSGKLVEGSSRNFIEPKPQNNLNRPIEKFQSEVMPPKAAKTIPVTHHKLLSPIKSPGFIPTNNAAYIMEAAARIIEPSPQATTKARAHLAATSSVSLRVRDHKEKAEASQKGPLVGSSSMPPRIRDLKEKGEISNRSSRISELSQRPAESNSSKYLKRQSLNKSWNGSVDAPTRSSTEAKEDSSVKNAGKSISLAIQAKVNVQRREGLNSGGGRSLVDQKEDSDTKTHQPLRANVQKSLHKKPSGQNASGVLKPNSLKQNHSIEKDKQPSKQVVSTPHRKSLTGDSGRHRSSSSKTPAKSKVSSKKSATQLTDSEKEVLYTHTNNFPRKKRSTDRNWNDRVVDNLFIDKNHRPVQSSLVSNKRHSDEEVKKKDMDVVSFTFTTPLARNNSGFEASGQAVRKTGGLPFDHHIKRMLLDTDSTRSPIGYNVIGGDALGILLEQKLRELTNGLESSCDDSSKGRPSSSTGPKSKDLAPMSDSVNFVPQLQLKRDQDLLWADKMEECKSNLVETQSFNCRLPSPISVLEPSFSAETFESSFSTDAASTEGSKLSSSALAQEVHGLNFSRKFYSAEADTELCDSACSTSTGTMTVNKEHTSTSTLSSTWELDYVKEILCNVELMYMDFAAGRTHKIVNPHLFNQLESHREAEYESDGGECRIRRKVIFDCVSECLDLRCRRCVNGGYEMWGKGIEMVRRNEWLAKEVYKEISSWRGMGDSMVDELVDKDMSHQYGRWLDFEVDAFELGAEVEDQILNSLLDDVVADILQ 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241739g00009 1010 MobiDBLite consensus disorder prediction 696 718 - -
Stsc241739g00009 1010 MobiDBLite consensus disorder prediction 696 723 - -
Stsc241739g00009 1010 MobiDBLite consensus disorder prediction 329 434 - -
Stsc241739g00009 1010 MobiDBLite consensus disorder prediction 520 561 - -
Stsc241739g00009 1010 Pfam Domain of unknown function (DUF4378) 851 1003 IPR025486 -
Stsc241739g00009 1010 MobiDBLite consensus disorder prediction 383 420 - -
Stsc241739g00009 1010 Pfam DUF761-associated sequence motif 183 213 IPR032795 -
Stsc241739g00009 1010 MobiDBLite consensus disorder prediction 505 519 - -
Stsc241739g00009 1010 MobiDBLite consensus disorder prediction 475 504 - -
Stsc241739g00009 1010 MobiDBLite consensus disorder prediction 450 561 - -
Stsc241739g00009 1010 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 99 1007 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241739g00009 Stsc-Chr241739 50266 55581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241739g00009 116 1009 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 32.382 3.07e-94 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241739g00009 - - gmx:102660038 1183.32