Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241739g00004 ATGGCATCGCACTACTTCCTCAGCTGCTTTATAAGCCGCATCGCCGTTTTATCCATCGTGTTGATCCAAACGACGCCGTTTTCTGCAGCCCAGTCATCATCCTGTAACGGCATATCCGTCTCATACGCCTACACCGGCGGGGCGCGCCTCCCGCCCAATGTCTCCGATGCGGCCAAGCAACCCTACCGGTTCCAGTCCACGCTCACTGTTCTCAACAACGGCCTCGACGACCTCAAGTCATGGAAGGTCTTCGTCAAGTTTCAGCACAACGAGTTCCTTGTCTCTGCTGACGGCGCCGTCCTCGCCGATGGCACCACCCTCCCCGCTGCCGTCGGTAACGGAACTGTCTTCGCCGGATATCCTATGACTGACCTAAAGACTGCGGTGGAAACCGCCGGCGACATGACACAGATGCGAGTCCAGATCGACCTCGTTGGCACCGTTTTCGGAGTGGCCCCACCCGCTGTTCCTCTTCCTTCCTCCATCAACCTCGCCAACGATGGATTCATCTGTCAGAAGCCAAGTGGTCAAGGGAAGAATGCGAGTAATGTGTGTTGCACAAAGGACCCGAAGTTCAAAACGAACATAACTACAGATGATGAGTTCCTGCCCCGTCAAAATGGTGATCTGTCAATCATGTATGATGTGATTCGAACTTATGATTCCAATTACTGGGCTGAGGTTACCATTGCAAACCATAACCCTCTTGGTCGTCTTGACAACTGGAAATTGAGCTGGGATTGGATGAATGATGAGTTTATATACTCAATGAAAGGGGCTTATCCTTATGTTGTGGATGCTTCTGATTGTGTCTTTGGTAAGCAAGGGACATACTACAAGGAGCTTGACTTTGCCAATGTCTTGAATTGTGAGAGAAGGCCAACCATCATTGATCTCCCTCCCACCAAGTTCAATGATACGGATCTTGGGAAGATCCCTTTTTGCTGCAGGAATGGTACTATATTGCCACCCTCCATGGACCCTAGCCAATCCGTTTCAAAATTCCAGATGCAGGTTTTCAAGATGCCGCCTAATCTCAATCGCTCTCAGCTTTCACCACCACAGAACTGGAAGATAAACGGCACCCTCAACCCAACTTACAAGTGTGGCCCTCCAGTGAGAGTGAGTCCTAGTGAAAATCCGGATCCATCAGGCTTGCCGTCAAACAAGACTGTGATGGCAAGTTGGCAGGTTGTGTGCAACATAACAAAGGCCAAGGGAGCAACCAGCAAATGCTGTGTCTCGTTTTCAGCATATTACAATGATTCAGTTATTCCTTGCAAAACATGTGCATGTGGATGCCCCACNNNNNNNNNNCATGTAGTACTACTGCACAGGCTATGTTCCTTCCACCAGAGGCACTTCTTGTTCCTTTTGATAACCGAACTGCCAAGGCTGTTGCTTGGGCTGATCTGA 1416 0.4965 MASHYFLSCFISRIAVLSIVLIQTTPFSAAQSSSCNGISVSYAYTGGARLPPNVSDAAKQPYRFQSTLTVLNNGLDDLKSWKVFVKFQHNEFLVSADGAVLADGTTLPAAVGNGTVFAGYPMTDLKTAVETAGDMTQMRVQIDLVGTVFGVAPPAVPLPSSINLANDGFICQKPSGQGKNASNVCCTKDPKFKTNITTDDEFLPRQNGDLSIMYDVIRTYDSNYWAEVTIANHNPLGRLDNWKLSWDWMNDEFIYSMKGAYPYVVDASDCVFGKQGTYYKELDFANVLNCERRPTIIDLPPTKFNDTDLGKIPFCCRNGTILPPSMDPSQSVSKFQMQVFKMPPNLNRSQLSPPQNWKINGTLNPTYKCGPPVRVSPSENPDPSGLPSNKTVMASWQVVCNITKAKGATSKCCVSFSAYYNDSVIPCKTCACGCPTXXXHVVLLHRLCSFHQRHFLFLLITELPRLLLGLI 471
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc241739g00004 471 PANTHER COBRA-LIKE PROTEIN 7 28 454 - -
Stsc241739g00004 471 Pfam COBRA-like protein 224 403 IPR006918 GO:0010215|GO:0016020
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc241739g00004 Stsc-Chr241739 22464 24899 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241739g00004 35 434 COBRA Gene Family AT4G16120 68.500 0.0 598
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241739g00004 - - gmx:100803929 768.459