Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241734g00024 ATGGAGTTTGGGATTGATGACTCCATTAATGGTGAGACAATAGCACATGCTACCATAGGAGAAGTTAATAGTAGCATTGGTGAGGAAGATAAAATTGCTAGCAGTTCATTTGATGCAGCTTACAAACAAGATGAACATGATCAAATAACACAAGATTCTTCTGGAGGGGACACAATCCCATCAGCAATTCCTGCTGTATCAGTTGTGTCAGCTGAAGAGCCCTATGTGGGTCAGGAGTTTGATTCAGAAGCAACAGCGCATGCATTTTATAATGCATATGCCACGCGTGTTGGATTCGTCATTCGTGTAAGTAAGCTCTCGCGGTCGAGGCGTGATGGATCTGCAATTGGACGTGCTCTTGTTTGCAACAAAGAGGGTTACAGAATGCCTGATAAGCGTGAGAAAATTGTAAGGCAAAGGGCAGAGACAAGGGTTGGTTGCAGGGCAATGATTTTGGTGAGGAAAGTTAGTTCTGGTAAATGGGTTGTCACAAAGTTTGTAAAGGAACACACACACCCTTTGACACCTGGAAAAGGTAGAAGGGATTGCATTTATGAACAGTTTCCGAATGAACATGATAAAATTCGAGAACTATCTCAGCAATTGGCTATAGAGAAAAAACGATGTGCGGCTTATAAAAGGCAACTTGAATTGTTATTTGAACACATAGAGGAGCATAATAATAGTCTTTCAAAGAAAATACAGCACATAGTAGGCAATGTGAAGGATATTGAAGCCGAAGAACAACAGCGTCAGCATCATAGATAG 768 0.4128 MEFGIDDSINGETIAHATIGEVNSSIGEEDKIASSSFDAAYKQDEHDQITQDSSGGDTIPSAIPAVSVVSAEEPYVGQEFDSEATAHAFYNAYATRVGFVIRVSKLSRSRRDGSAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLTPGKGRRDCIYEQFPNEHDKIRELSQQLAIEKKRCAAYKRQLELLFEHIEEHNNSLSKKIQHIVGNVKDIEAEEQQRQHHR 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241734g00024 255 Coils Coil 195 215 - -
Stsc241734g00024 255 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 10 249 - -
Stsc241734g00024 255 Pfam FAR1 DNA-binding domain 89 175 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241734g00024 Stsc-Chr241734 127785 130249 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc241734g00024 FAR1 7.4e-31 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241734g00024 - - gmx:100806900 414.075