Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241734g00023 ATGGAGTTCTCCTCATCACAATTCTTCATTGGGTTTCTTCTCGAGCTTGTGGTTTTGGGGGGCCTATGGTTGCAAGTTTCAAGCTTTGGTTCCATGTCTTCTATGGCAGCCTCCTTTGGTGACAAAGGCAATGCTTTTTGTGGTCTGAAACCAGATGGGTCTCATACTGTGACCTGTAATGGATCAAACTCAGCCATAATTCATGACACACCAGCTCAATTTCAGTTCCTTGGCCTAACTGGTGGCTATGGCTTTTTGTGTGGAATTCTAATGAGTTCTAAGCAACCTTATTGCTGGGGTAGAAATGGCCATATTGCAGAAAAACTTGGTGTGCCACAACCTATGGTTAAAGGAGCTCAGTACCTAGAAATCAGTGCTGGGGATAACCATCTTTGTGGATTGAGGAAACCTTTGATTTGGAGAAAAAGGGAAAGGAAGAACACTTCAGTTGTTGATTGTTGGGGCTTCAACATGACCCGTACCTATGTGTTTGATGGAATGATTCAATCAATCTCAGCCGGTTGTGGTTTCAATTGTGGCTTGTTTTCCCAAAACAGGACTGCATTCTGTTGGGGTAATCATGATGCTAATAGTCTAGCAATTCTTGCAGTTCCTTGTGGCGAGAGATTCCGGAAGCTTGCTGCTGGTGGAAATCATGTGTGTGGAATCCTAGAAGGGGTGAATTCTAGGACTGTTTGTTGGGGAAGGAGCTTGGATGTGCAAATGGCGAAAATCGCATCAAAACATGCAGGACAAGGCCTAGGTAATGTTTTATTGCCTCCAAATGATCCCATGATCTCTATAGCAGGAGGAAGGTTTCATGCATGTGGCATTAAGAGCAATGATCTTGGAGTCGTTTGTTGGGGCCATACCTTTGGCCAAGGAACACCAGTTCCAAGTGGGACTAAGATAACTGATATTGTTGCTGGCGACTATTTCAATTGTGCAAATCTTGCTGAGAAATCTGATCAGATTCTTTGTTGGGGTGTTGGATTTTCTAGCTCTCTTCCAAAGCCAGCTGCATTACCAAGGAAGTGCAATTCCAATTTATGTCCTCCAGGTTCATATGAAATGAAGCAGCATAAGGATAAAGGTGTTTGCAATTCATCAGATACTCACTTTTGTGTTCCTTGCAGTGGTGCTTGTCCTTATGAAATGTATCAGATAAGTCCTTGCAATTCGACATCTGATAGGATATGTGAATATAACTGTTCTGCTTGTGTCTCACTTCAATGCTTCTCCATTTGCTCCCCTTCTCCTCTCAGTGCTCCTCCCACTGTGAGGAACAAAGATGAAAGATTCTGGTCTCTCCAGGTGCCAGTTCTTGTCGCGGAGATAGTTTTCGCAATTTTCTTGGTTAGTATTCTATCTACAACTGCAGTTTTATATGTTAGGTACAAGCTTAGAGATTGTCAGTGTTCAGCAACAAGGTCATCAAAGGTGAAGAAACACATAATTGTGAGTTCTTCACTCCAAAAGGAGAATAGTAAGATTCGTCCCGAGATTAGGAAGGCTAAGAAATTTAACTATGAAGAGCTTGAAAGGGCAACTAGTGGATTCAAAGAAGAAAATATAGTGGGGAAGGGAAGTTTTTCATGTGTGTTCAAGGGTGTTCTGAAAGATGGAACTGTTGTTGCTGTCAAAAGAGCCATAAGGTCACAGAAGAGTTCCAATGAGCTACACACAGAACTGGACTTGCTCTCAAGGTTGAACCATGCACATTTGCTCAGTCTCCTAGGCTATTGTGAAGAAGGCGGAGAGATAATCCTTGTTTATGAGTTCATGGCTCATGGTTCTTTGCACCAACACCTCCATGGCCAAAACAAGGAGTTAAAACAACAACTTGATTGGGTCAAAAGGGTAACAATTGCAGTCCAAGCAGCGCGAGGAATAGAATATCTTCATGGCTATGCTTGCCCTCCTGTGATTCATAGGGACATCAAGTCTTCAAACATCCTCATTGATGAAGAACACAATGCAAGAGTGGCTGATTTCGGTTTATCATTGCTTGGCCCCGCAGATAGCAGCACCCCACTTGCCGAGCTACCAGCCGGAACACTCGGCTATCTTGATCCGGAGTACTATAGGCTTCATTATCTCACAACAAAATCTGATGTCTATAGCTTCGGTGTCCTGCTTTTGGAACTCCTAAGTGGTAGAAAAGCCATTGACATGCAATATGAAGAAGGGAACATAGTTCAATGGGCAAAGCCTCTAATCAAATCAGGGGATATTGCTGCAATCCTCGACCCGGTTCTTAAACCTCCTCCTGATCTTGCAGCCTTGAAGAAGGTTGCAATTGTGGCTTGCAAGAGTGTAAGAATGAGAGGGAGGGATAGGCCTTCAATGGACAAAATAACAACAACTTTGGAGCATTCTCTTGCAAGGTTAATGGGTAGCCCTTGTATTGAACAACCAATTTTACCAACTGAGGTGGTTTTAGGAAGCAGCAGATTGCACATGAAATCATCTCAGAGGTCTTCGAACCGGTCAGAAATCGATGTTGGAGAGAACGAGGATCAGAGGTACGAGTTTAGAGCACCCTCATGGATAACATTCCCAAGTGTTACTTCATCTCAGAGGATAAAGTCATCAAGCTCAGAGGCTGAGGTTGATGTGAAGAATAATAATAATAATAGCAATGTTGGAAGTGGTGGTGATGTTTTGAAGAGTCTTGAGGAAGAGATTGGTCCTGCATCTCCTCAAGAAAGGTTGTTCTTGCAGCATAACTTCTAA 2736 0.4313 MEFSSSQFFIGFLLELVVLGGLWLQVSSFGSMSSMAASFGDKGNAFCGLKPDGSHTVTCNGSNSAIIHDTPAQFQFLGLTGGYGFLCGILMSSKQPYCWGRNGHIAEKLGVPQPMVKGAQYLEISAGDNHLCGLRKPLIWRKRERKNTSVVDCWGFNMTRTYVFDGMIQSISAGCGFNCGLFSQNRTAFCWGNHDANSLAILAVPCGERFRKLAAGGNHVCGILEGVNSRTVCWGRSLDVQMAKIASKHAGQGLGNVLLPPNDPMISIAGGRFHACGIKSNDLGVVCWGHTFGQGTPVPSGTKITDIVAGDYFNCANLAEKSDQILCWGVGFSSSLPKPAALPRKCNSNLCPPGSYEMKQHKDKGVCNSSDTHFCVPCSGACPYEMYQISPCNSTSDRICEYNCSACVSLQCFSICSPSPLSAPPTVRNKDERFWSLQVPVLVAEIVFAIFLVSILSTTAVLYVRYKLRDCQCSATRSSKVKKHIIVSSSLQKENSKIRPEIRKAKKFNYEELERATSGFKEENIVGKGSFSCVFKGVLKDGTVVAVKRAIRSQKSSNELHTELDLLSRLNHAHLLSLLGYCEEGGEIILVYEFMAHGSLHQHLHGQNKELKQQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSSTPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLELLSGRKAIDMQYEEGNIVQWAKPLIKSGDIAAILDPVLKPPPDLAALKKVAIVACKSVRMRGRDRPSMDKITTTLEHSLARLMGSPCIEQPILPTEVVLGSSRLHMKSSQRSSNRSEIDVGENEDQRYEFRAPSWITFPSVTSSQRIKSSSSEAEVDVKNNNNNSNVGSGGDVLKSLEEEIGPASPQERLFLQHNF 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241734g00023 911 Gene3D - 23 253 IPR009091 -
Stsc241734g00023 911 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 350 400 IPR001368 GO:0005515
Stsc241734g00023 911 SUPERFAMILY RCC1/BLIP-II 43 290 IPR009091 -
Stsc241734g00023 911 ProSiteProfiles Protein kinase domain profile. 520 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241734g00023 911 FunFam Receptor protein kinase CRINKLY4 595 797 - -
Stsc241734g00023 911 MobiDBLite consensus disorder prediction 819 839 - -
Stsc241734g00023 911 Pfam Protein kinase domain 520 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241734g00023 911 Gene3D Transferase(Phosphotransferase) domain 1 595 798 - -
Stsc241734g00023 911 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Stsc241734g00023 911 Gene3D - 254 412 IPR009091 -
Stsc241734g00023 911 MobiDBLite consensus disorder prediction 863 888 - -
Stsc241734g00023 911 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Stsc241734g00023 911 MobiDBLite consensus disorder prediction 863 886 - -
Stsc241734g00023 911 SUPERFAMILY Protein kinase-like (PK-like) 500 790 IPR011009 -
Stsc241734g00023 911 SMART serkin_6 520 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241734g00023 911 CDD STKc_IRAK 526 791 - -
Stsc241734g00023 911 FunFam receptor-like protein kinase FERONIA 482 594 - -
Stsc241734g00023 911 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 16 911 - -
Stsc241734g00023 911 Gene3D Phosphorylase Kinase; domain 1 479 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241734g00023 Stsc-Chr241734 124326 127075 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241734g00023 12 911 Receptor kinase-like Gene Family AT3G59420 60.131 0.0 1081
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Stsc241734g00023 Pkinase 6.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241734g00023 - - gmx:100797455 1265.75