Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241731g00010 ATGGCGCCGGCGCCACCGACAAAACGAGACGAGCAAGAAGCTCTGCGCCTCAAGTCCCTCGCGGACTCCAAGTTCACTTCCTCCAAAGACCTCAATTCCGCCTTCAACTACGCCAAGCGCGCCCACCGCCTCGCCCCAAACCTCCGCGGCGTCGCCGAGACCCTCGCCGCCCTCACCGTCCTCCGTGCCGCCGCCACCGCTGCTAGCAACTCCCCCTTCCCCGACTGGTACGCCATCCTCGGTGCTGAGCCCTTCGCCCCCGCCGCCGTCCTCCGCAAACGCTACAAGCAGCTGGCACTCCTACTCCACCCCGACAAGAACCCCCACGTGGCATCTAATGAGGCATTCAAGCTCGTCGCCGAGGCCTTCCGGTTGCTATCCGACAGGCCCTGGAAGAGGGATTACGATGCCAAGCTCAGGTTGCGGATTCTGGACGAGAAGGAGAAGGAGAAGGCTGGTGAAGAGGACAGGGATACGTTTTGGACTGCATGCTCCACTTGCAGGCTATTGCACCAGTTTGAGAGGAAGTACGTTGGCCATATTCTGGTATGCCCCACTTGTAGGAAGTGTTTTAAGGCTGTAGAAGTAGGTAGTGATGATGATGGGTCTCAAGAAGAGGAAAACGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAATGGTAGAGAGGGCTAAGAAGGGTAGGAGTGGGAAGTTGAAATCAAAAGAGGCGGTGGATGATGGTGAGAGATTGGGGGATTTTTTGTTGAGAAGAAAATCCAAGAATGTGAAAGGGAAAATGGATGGTGAAAATGGTGGAGGCTTGATGAGGAGCCAGGGTTTGAAGGGTGGAGTTGAGGGTGATGAAGTGAGAAATGAGGATTCTGAGAGTGGAGGAGAGGGTGTTGAGGGAAGGTTGAAAAGTGGTGATTTGAGGAAAAGGACTACGGAGAAAGTGGGTATCGAAAAAGGTGGAGGCTTGGCAAGGAGCAGGTGTTTGAAGGGTGGAGTTGAGAGTATTGAAGTGGGAAATGAAGCCTTGGAGAGTGAAAGAGAGGGTGTTGGGGGAAGGTTGGGAAATAGGGATTTGAGGAAGAGGACACATATGGTTGGGGAGGTGTTGGACACTTCAAAACCCAAGAGGGTCAAAACTGGGGAGGAAATGATGACATTGGCTGAGTTTCAGTCTGAAGTGAAGAGAACCGCTCAGCAGAAGAAGATGAAGTTGAAAATAAAGGAGAATGGAGAAGATCATCGAACAGAGAGGAGGAGCAAGCAGAGGGAGAAACTAGGTGAGTTGAAAAATAACAAGGATTTAGAGGCTGGGGAAGATAGGAGTATGAAGAAGAGTGCGAAGCTATTAGTCAAGGGGAAGAAAGAGGACTCTGTGAAGAAAACGGAAGTGAGACCTGAGAAGCACAGGGATTCTGGTGGATGGGACTTGGAGACCATGACAGTGGTGGATTCGGATTTTTATGATTTTGACAAAGACAGAACTCAGAGATGCTTTAGGAAAGGCCAAATATGGGCTGTATATGATGATATTGATGGAATGCCTAGGCATTATGCCTTGATTGATGAAGTTTTTTCAGCAAATCCTTTTCAAGTGGGTATAAGTTGGTTTGATATACAAAACAATGGGGTTGAAAAGATTATTAGTTGTGAAAAAATGGTATTTCACATGCCTTGTGGAAGATTTACAGTTGCCCAGAAGGCTTCCATAAATTCGGTAAACATATTTTCTCATGTTGTGGACTGTGATCGGGTAGCACGTGAGGTTTACCAAGTTTATCCAAAGAAGGGCTCAGTATGGGCACTTTATGGTAAGGCAACTCTTGATAAAGATGGAAAAAATTTTGCAGCCAAGACCAAGAGATGCTATGACGTTGTTGTATTCTTAACAAGTTACAGTGAAATCACTGGTCTGAGCATGGCATATCTTGAGAAGGTTGATGGTTATCAGACTGTATTTAAGAGACAGGACATGGGGAGTCATGCTATTAGATTTCTTGGAAAGGATGAACTGTGGTTAGTTTCTCATCAGATTCCTGCAAGGAAACTATCTTGTAAGGATACTCCTGAGCTTTTGAAAGATTGTTGGGAACTTGATCCTGCTTCACTTCCCTCAGATTTACTTACTGTAGGTGGCATAGATATTTGA 2142 0.4785 MAPAPPTKRDEQEALRLKSLADSKFTSSKDLNSAFNYAKRAHRLAPNLRGVAETLAALTVLRAAATAASNSPFPDWYAILGAEPFAPAAVLRKRYKQLALLLHPDKNPHVASNEAFKLVAEAFRLLSDRPWKRDYDAKLRLRILDEKEKEKAGEEDRDTFWTACSTCRLLHQFERKYVGHILVCPTCRKCFKAVEVGSDDDGSQEEENEEEEEEEEEEEEMVERAKKGRSGKLKSKEAVDDGERLGDFLLRRKSKNVKGKMDGENGGGLMRSQGLKGGVEGDEVRNEDSESGGEGVEGRLKSGDLRKRTTEKVGIEKGGGLARSRCLKGGVESIEVGNEALESEREGVGGRLGNRDLRKRTHMVGEVLDTSKPKRVKTGEEMMTLAEFQSEVKRTAQQKKMKLKIKENGEDHRTERRSKQREKLGELKNNKDLEAGEDRSMKKSAKLLVKGKKEDSVKKTEVRPEKHRDSGGWDLETMTVVDSDFYDFDKDRTQRCFRKGQIWAVYDDIDGMPRHYALIDEVFSANPFQVGISWFDIQNNGVEKIISCEKMVFHMPCGRFTVAQKASINSVNIFSHVVDCDRVAREVYQVYPKKGSVWALYGKATLDKDGKNFAAKTKRCYDVVVFLTSYSEITGLSMAYLEKVDGYQTVFKRQDMGSHAIRFLGKDELWLVSHQIPARKLSCKDTPELLKDCWELDPASLPSDLLTVGGIDI 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241731g00010 713 MobiDBLite consensus disorder prediction 200 220 - -
Stsc241731g00010 713 ProSiteProfiles dnaJ domain profile. 75 139 IPR001623 -
Stsc241731g00010 713 MobiDBLite consensus disorder prediction 278 314 - -
Stsc241731g00010 713 PANTHER BNAC03G44070D PROTEIN 11 702 - -
Stsc241731g00010 713 Pfam Domain of unknown function (DUF3444) 476 682 IPR024593 -
Stsc241731g00010 713 MobiDBLite consensus disorder prediction 256 321 - -
Stsc241731g00010 713 Coils Coil 200 228 - -
Stsc241731g00010 713 SMART dnaj_3 74 131 IPR001623 -
Stsc241731g00010 713 MobiDBLite consensus disorder prediction 392 470 - -
Stsc241731g00010 713 CDD DnaJ 75 128 IPR001623 -
Stsc241731g00010 713 MobiDBLite consensus disorder prediction 221 238 - -
Stsc241731g00010 713 Pfam DnaJ domain 75 136 IPR001623 -
Stsc241731g00010 713 MobiDBLite consensus disorder prediction 393 470 - -
Stsc241731g00010 713 Gene3D DnaJ domain 62 165 IPR036869 -
Stsc241731g00010 713 PRINTS DnaJ domain signature 77 95 IPR001623 -
Stsc241731g00010 713 PRINTS DnaJ domain signature 95 110 IPR001623 -
Stsc241731g00010 713 PRINTS DnaJ domain signature 111 131 IPR001623 -
Stsc241731g00010 713 MobiDBLite consensus disorder prediction 198 238 - -
Stsc241731g00010 713 SUPERFAMILY Chaperone J-domain 70 139 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241731g00010 Stsc-Chr241731 50930 53367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241731g00010 10 196 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.995 2.07e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241731g00010 - - aip:107642362 1140.95