Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241731g00003 ATGCGATCCATGGAGAGCACCGCCGAGAACGCCAAATCCAAAGAAATCGACCGCCCATACGATTCTTTCCGAAAGAAGAGAATGCGACCTATCAGGCTCCCATCTTCCGAACTCGCTATCTTTTCTAACATGGAACAACCATCATCCTCCTCCACCACTAACAACGCGCCGCATCAGAACTGCACCGCCGCCGCCTCCGCTTCCCACGGTTTCATATCCGTCATCGGTCGAAGGAGAGTCATGGAGGACGCTGTTAGAGTTCTCCCTGCCTTCGTGCTGGCGGAAGACTGTTGTTCCGGAGGCTACGATTTCTTTGCGATTTACGATGGGCACGGCGGAAGCATGGTGGCGAATGCTTGTCGCGAGAGGCTGCACGTGTTATTGGCGGAGGAAATGAAGGCGGCGGCAGCAGCCTTGGATTGGCATCGCATGATGTGCTCCTGCTTCATGAAGATGGACCAAGAGATTGGAGGTGGCGACGGCAATGATAATAACGTGGCTGGAGGGAACACGATGGGTTCTACGGCCACAGTGGTTGTTGTTGGAAAGGAGGAGATTGTGGTTGGCAATTGTGGAGACTCTAGGGCGGTGTTGTGCCGCGGCGGTGAAGCCGTGCCTCTCTCACGTGATCATAAGCCTGATCGAGAAGATGAGAAAGAGAGAATAGAAGCGGCAGGTGGAAGAGTGATTGATTGGAATGGGAATCGTGTATTAGGCGTTCTTGCAACATCAAGATCCATAGGGGACCACTGCATGAAGCCATTTGTGATATCTCAACCGGAGATAAAGGTGTGGCGGAGAACAGATTCCGATGAGTTTGTGGTGGTGGCCAGCGACGGGCTGTGGGATGTGGTGTCAAACAGTTTAGCGTGCCAAGTTGTGAGGAGTTGTCTTTGTGGGAAGACGAGCGTGACCACAACTGCCGATGCAGCCGCCTCTTTGCTAGCGGAGCTCGCTATGGCACGTGGTAGCAAAGACAACATCACTGTCATTGTCGTCCAGCTCATCAACACTTCAACTTAA 1023 0.5308 MRSMESTAENAKSKEIDRPYDSFRKKRMRPIRLPSSELAIFSNMEQPSSSSTTNNAPHQNCTAAASASHGFISVIGRRRVMEDAVRVLPAFVLAEDCCSGGYDFFAIYDGHGGSMVANACRERLHVLLAEEMKAAAAALDWHRMMCSCFMKMDQEIGGGDGNDNNVAGGNTMGSTATVVVVGKEEIVVGNCGDSRAVLCRGGEAVPLSRDHKPDREDEKERIEAAGGRVIDWNGNRVLGVLATSRSIGDHCMKPFVISQPEIKVWRRTDSDEFVVVASDGLWDVVSNSLACQVVRSCLCGKTSVTTTADAAASLLAELAMARGSKDNITVIVVQLINTST 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241731g00003 340 MobiDBLite consensus disorder prediction 1 21 - -
Stsc241731g00003 340 MobiDBLite consensus disorder prediction 7 21 - -
Stsc241731g00003 340 Gene3D - 62 339 IPR036457 -
Stsc241731g00003 340 ProSiteProfiles PPM-type phosphatase domain profile. 68 335 IPR001932 -
Stsc241731g00003 340 SUPERFAMILY PP2C-like 62 335 IPR036457 -
Stsc241731g00003 340 ProSitePatterns PPM-type phosphatase domain signature. 104 112 IPR000222 GO:0043169
Stsc241731g00003 340 SMART PP2C_4 58 333 IPR001932 -
Stsc241731g00003 340 CDD PP2Cc 68 335 IPR001932 -
Stsc241731g00003 340 SMART PP2C_SIG_2 93 335 IPR001932 -
Stsc241731g00003 340 Pfam Protein phosphatase 2C 70 328 IPR001932 -
Stsc241731g00003 340 PANTHER PROTEIN PHOSPHATASE 48 334 IPR015655 GO:0004722|GO:0006470
Stsc241731g00003 340 FunFam Protein phosphatase 2C 51 61 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241731g00003 Stsc-Chr241731 19135 20590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241731g00003 69 335 PP2C-type Phosphatase Gene Family AT4G26080 45.033 6.99e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241731g00003 K14497 - gmx:100813248 410.994