Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241730g00015 ATGGCTAGGAGCAGATTCACCTTCCCATGGTTCCAATGCGGCAGAAATTCTCCTTCTTCTAGTGACGAAAACAAATTGAAAGAACCTCTCATGGATGCCGATAACTCTACATCTGAGGTACTGCCCTTAAGAAAGAGGAAGAGAGCAAATGCCTTTCTTGAATCAGAGGGTTCAGGCGATGGAAGGACAGCACCACCTAATGAGGAAAACAAGACGATGAAAACCACGAAAATAGAAAGAAGCTGTTCGGTGCAAGAAAATAATAATCATCAACATTATTTCAACGAAGCTGAAATTGAAGTTGCTGAAATCTTGCAGAACCTTAATACTTCCTTTTTAGAGAGACTTAATTTAGAGACTTCAAACAGCACGGTGACTTCAAGCCCAAGTAATGCACCAAGGGTTTCTCTTTCTCCCATCAATAGGGAAAGAAGGGGAGCAGTTAATCAAAGAAACCCTGAACCTGAATTGCCACAAAATTTCAAGACTGTGATAAGTGATAGGGGTGGCAGCAGGATCAGTTTAGTTATCGAAAAGACTCTGTGTGCGTCGGACTTGAATCGGCAACAAAACCGGCTTTCAATGCCGTCAGCGCAGATAAAGGATAGAGAGTTTGTGTTTCCTGCTGAATTAGCAAGTCTAGATAACAAAGGGGAAATCAAAGTGGAAGTGATACAACCGTCGCTCGAAATCAGTGAGTTGACTTTAGTTAAGTGGTTCATGCCCAAGGATAACGGATCAGTAAGCACTACCTATGTTCTTCGCTCAAATTGGATGGACGTTGCAGAGGCTAACGAACTACAAAAATATGACGTTGTTCAAGTTTGGTCGTTCCGAGTCCAAGAGCAATTATGCATGGCAATTGTTAAACTTTGA 876 0.4201 MARSRFTFPWFQCGRNSPSSSDENKLKEPLMDADNSTSEVLPLRKRKRANAFLESEGSGDGRTAPPNEENKTMKTTKIERSCSVQENNNHQHYFNEAEIEVAEILQNLNTSFLERLNLETSNSTVTSSPSNAPRVSLSPINRERRGAVNQRNPEPELPQNFKTVISDRGGSRISLVIEKTLCASDLNRQQNRLSMPSAQIKDREFVFPAELASLDNKGEIKVEVIQPSLEISELTLVKWFMPKDNGSVSTTYVLRSNWMDVAEANELQKYDVVQVWSFRVQEQLCMAIVKL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241730g00015 291 MobiDBLite consensus disorder prediction 13 38 - -
Stsc241730g00015 291 CDD B3_DNA 177 290 IPR003340 GO:0003677
Stsc241730g00015 291 SUPERFAMILY DNA-binding pseudobarrel domain 176 286 IPR015300 -
Stsc241730g00015 291 MobiDBLite consensus disorder prediction 51 71 - -
Stsc241730g00015 291 Gene3D - 174 291 IPR015300 -
Stsc241730g00015 291 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 70 291 IPR005508 GO:0003677
Stsc241730g00015 291 Pfam B3 domain-containing protein At2g31720-like 167 263 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241730g00015 Stsc-Chr241730 119885 120760 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241730g00015 156 288 B3 DNA Binding Superfamily AT1G05930 26.950 1.26e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241730g00015 - - aip:110269262 254.988