Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241729g00026 ATGAAAACAAGTGCTGCAAATGTAAATTTCTTGAATTTCAGTTCCTCTTCTTTCTGTTGTGGAACGGATGAACACGATTTTCGATGGATCGGAGGCTTTCGCCCTTCTAAAATTTTGCAGATTATGTTGCCACAACTTGAAGATTCATGTAATTGCCAGCAACAAGTGTGTGATATTATCAAGTTTGGAAAATCATGTGAGCAAGCAGAATATGCTCTTTCACAAGGCATGGAGAAGCTACATCAATTTCATGCTAAAGCAACAGCAGCAGGTGACAAAGGATTTCAAGTGATTTTTGTTTCTCAACTGATTAGTTTTTTAAAGCAGGCTAATCATCTTCGTCAAGAATTCCTGCATCGATTCTCGCGATTTCTTACGGTTTCCCAAGAAGCTCAAATCTTGCTTGCCTTGGGGATTAAGCTTTCTCAAGATATATGA 438 0.3836 MKTSAANVNFLNFSSSSFCCGTDEHDFRWIGGFRPSKILQIMLPQLEDSCNCQQQVCDIIKFGKSCEQAEYALSQGMEKLHQFHAKATAAGDKGFQVIFVSQLISFLKQANHLRQEFLHRFSRFLTVSQEAQILLALGIKLSQDI 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241729g00026 145 PANTHER TRANSCRIPTION FACTOR TGA9 2 138 - -
Stsc241729g00026 145 ProSiteProfiles DOG1 domain profile. 1 145 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241729g00026 Stsc-Chr241729 125596 126805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241729g00026 1 138 Calmodulin-binding Proteins AT5G10030 41.216 1.78e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241729g00026 K14431 - aip:107617158 252.292