Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241729g00015 ATGCCAGGCTTTCCTGTTGCAACTTGTCAAACATCATACTCGAGAAACACAAATCAAATAAGCTATCCAGATGCTCATGGCCATTCATCTCCTGAAGAGGAGCTTGCTGCAGAAGAGAGTTTTGCAGCTTATTGCAAGCCAATAGAATTCTACAACATTCTTCGGCAACGTGCTTTACGAAATCCTACTTTTCTTCAGAGATGTTTGGACTACAAGATAAAAGCTAGGCAAAAGAAGAGGATACAATTGACAGCTTTGCTGAGTGATACAGATGAAACTCAAGGTTTGTTTCCCTTGTATGTTTGTCTAGCAAGGCTGGTTTCTAACCATGAGGACGCCAAGACAAAGAAGTATGATGATGTATATCGCTTTGGTCGGATTTTCATCTTTCGAGATCCTTCTGAAGTTGATGGTGATACTCAACACAAAGCAAACTTTTTGCTCCCTGACATTCATAGGCTAGCTCTGACAGCTAAATCTGGGCCACTTGTTCTGTTGTTTTTCAGAGCTGAGGAGGACCCAAATTCCTCATCTGGGGTAAATAAAAGCCTGGTGCCTTTGGATCCGAGTTCATCTGAATCAAGAGATGGACAGTACTGCTTATGTGGGAAAGTATCTCTCGAAAAAGAATTTCAGTCATGGGATGAGTCTCCAAATTTAAGACTGGGACTTCAAGTTGAGGTTGTGTCAACTGTTGATCTTCATCCTTGTTTTCTTAAGTATGGTCGAGATAAGGAGCAGAACATCTCAGTTCAAGTATCAAATAATTTTGAGAATGGGTTTCCAAAGAGTACATCAAAGCAATTGCAAATCAAAATGTATGCTCAACAGTGTGGGGCTAAGGACAAATTTTCCCATCATACAAACATAACTGCACTAGCATCGCCATCATTATCTCGTCTCATCCAGTTGAAGGAGGGCAGCGTGATGTTTAATTATAGGTATTACCATGATAAGTGTCAGAAAACGGAAGTCACTGAAGATTTCTCCTGTCCAATATGTTTGGTTAGATGTGCAAGCTACAAGGGCATAAAATATCACTTGATCGCATCACATGATCTTCTCAACTATGAATTTTCGGCATGGGGGGACTGTCCAACAATAAGCATGTCTGTGAAGGCAGATGACTGGAAATCTGAGATGTTTGGAAATATTGTTGATCCCAAGTTGGACACTATTACCTTTTGTGCCAAACCACTTAAGCGCATACCGCCAGAGGATAGACAACCACTTGCCATAGAATTTCAACTTCCAACTGGAGAGGTTGATCATTTGGAGAAAGCTGATGGGGTGCCACTGTCAATTGTACCATTCCTACCTGATCAAGATTGTGTCCCACCTGCTGTGTTACCGGAAGCCAAAAAAAGGAAGTCAGCAATTCCGCGTAACATTGACCCAAAAATCCTAACCCAGTTTAGCAAGCGAATATTCTATCACTCTCAAAACCACCAGCCAATGGAACTTGAAGAAGTTCTAACAGAAAGAGATAGTGAGGATGAAGTTGACGATGAAGTTCCAGGGTTTGAAGATCAAAGGATGTTTGGTGACTTTGCTGCCAACATGACCGATGCTGAGAAGAAATTCATGCGTATGTGGAACTCGTTTGCACGAAAGAACCGGGTGGTGGCTGATCATCAGATTCCATGGGCATGTCAGGCTTTTGTGAAAGCTCATGGCTTTGAGCTTCTAGACTTGCATTGGTGTTGGAGAATGTTTTGCATCAAATTTTGGAATCAAGGTCTTCTAAATGCTCGGACTATTAATGCATGTAGCCTTATTCTTGAACAGTTTCAGAGGGAGAAATCAGCTGCAAATAATTAA 1821 0.4152 MPGFPVATCQTSYSRNTNQISYPDAHGHSSPEEELAAEESFAAYCKPIEFYNILRQRALRNPTFLQRCLDYKIKARQKKRIQLTALLSDTDETQGLFPLYVCLARLVSNHEDAKTKKYDDVYRFGRIFIFRDPSEVDGDTQHKANFLLPDIHRLALTAKSGPLVLLFFRAEEDPNSSSGVNKSLVPLDPSSSESRDGQYCLCGKVSLEKEFQSWDESPNLRLGLQVEVVSTVDLHPCFLKYGRDKEQNISVQVSNNFENGFPKSTSKQLQIKMYAQQCGAKDKFSHHTNITALASPSLSRLIQLKEGSVMFNYRYYHDKCQKTEVTEDFSCPICLVRCASYKGIKYHLIASHDLLNYEFSAWGDCPTISMSVKADDWKSEMFGNIVDPKLDTITFCAKPLKRIPPEDRQPLAIEFQLPTGEVDHLEKADGVPLSIVPFLPDQDCVPPAVLPEAKKRKSAIPRNIDPKILTQFSKRIFYHSQNHQPMELEEVLTERDSEDEVDDEVPGFEDQRMFGDFAANMTDAEKKFMRMWNSFARKNRVVADHQIPWACQAFVKAHGFELLDLHWCWRMFCIKFWNQGLLNARTINACSLILEQFQREKSAANN 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241729g00015 606 CDD VEFS-box_EMF2-like 474 596 - -
Stsc241729g00015 606 MobiDBLite consensus disorder prediction 173 195 - -
Stsc241729g00015 606 MobiDBLite consensus disorder prediction 174 195 - -
Stsc241729g00015 606 CDD ZnB-Zn_EMF2-like 303 377 - -
Stsc241729g00015 606 PANTHER POLYCOMB GROUP PROTEIN 28 603 - -
Stsc241729g00015 606 Pfam VEFS-Box of polycomb protein 466 591 IPR019135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241729g00015 Stsc-Chr241729 53428 61379 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241729g00015 1 598 C2H2 Transcription Factor Family AT5G51230 43.614 2.89e-149 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241729g00015 - - adu:107473598 929.858