Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241726g00002 ATGGCACCATTAACACCAAAATCCAATAATAATGATGACCCTGAGGAAAATCAAGCTCTTATTAAGCTTGAATCAGCATGTTCTGATTTACAATCTCTCCTCAAAGGAGCAGAGACCATGGAACACAACCTTGTAACCATGGAAACTCGCTTCGATCACTTACAAGGATCTTTGTCCAATGCTTCTAGAAGGATCACACCTTTGCAATCCTTGGCCATGTCAAGGAAAGCACTAGAAACAAGGATCAACCGAGCCGTCTCCCCGGCGCTGGAGCTCATCGAGACCTTTAAGGTCGCCGAGTCCCTCCAGCACCGGATTCTTGACCTCTCGGCCAAGCTTTCGGCCGAGAGGACCCAACAGAAGAGGCTCCAGAAGCTTCTAGAATACGTCGATTGCGTGGATCGGTTAAACGAGGCGATTAACTCTATATGTCAAGTTGGTGAGGGTGTGATTTTGAAGCTTCAAGAAGTTGTGGAGTTCATAAGCAGAACAAAGGCTGCTGATCAATACAGGACACAAAGGTTGAGAGAGGCACTAGCCACACTGAAGGCACTTTATGAAACAGAGGTGGATGAGATGAGATTTGAAGGGTTACTTGACCAAGCTTTGCTTCATATGCAAGATGAATTTGAGGCAATATTATTGAACAAAAAGCATAAGAATCTAGGAGATATGTCACAACTAACATATGATGATGATGAGAAAAATAATAATGATAATAACAATGAATTGCTTGTGAATAACAACTCTGGTGCTGGTTGTGAATTGGGGTCAGAGCTTGAAGTTGAAGTCCTCAGAAGAATTTCATTCACTCTTGCTGCTAATGATTGCTTGGATATTTGCATTGATATCTACGTCAAGGTGAGGTATAGAAGGGCTGCAAAAGCATTAATGAAGCTAAACCCAGATTACTTAAAAACATACACACCAGAAGGAATTGATGAAATGGAATGGGAAACCTTAGAATCAGCCATAACCCTTTGGACCCAACACTTCCAAGTTGCTGTTAAAAAAGTTCTCCAATCAGAGAAATCACTCTGCCAAAGAGTCCTTGGCACAATCATGGAAGGGCTAGTTTGGCCAGAATGCTTTGTTAAGATCTCAGACAAGATCATGGCCGTGTTCTTTCGGTTCGGCGAGGGAGTTGCGAGGAGCAGCAAGGAGCCTCAGAAGCTGTTCAAGCTCTTGGACATGTTTGAATCATTGGAAAGGCTTAAAGAGAATGTGTTGGAGACTTTTGAAGGTGAATCTGGTGTGGATATTTGTACTAGGTTTAGAGAACTTGAGAAGCTTATTATTGATGCATCAAGCAAAGTTTTTTGGGAATTTGGATTGCAAATTGAAGGCAATGCTGATGGACTTCCTACACCACAAGATGGTTCTGTTCCAAAACTTGTTAGGTATGCAATTAACTACCTAAAGTACCTTGCCTCGGATAATTACAGAACAGCCATGGCTAAGGTTCTAAGAACAGAGCAAATATGGAAAAATGGGATACTGTCCAAACAAGAAACAGATGAGAGTTTACTGAAGAATGCAATTTCCAATGTCATGGAAGCACTTCAAAGAAACATTGAATCCAAACGTTCAAGATGTAGGGACAAGATTTTAGTCCAAGTTTTCTTGATGAACACGTATTGGTACATATACATGAGGACCAAGAACACAGAACTTGGTGAGCTGTTGGGAGATCAATACATGAAGATTGGTTACAAAACCGTCGCCGAAGAATCGGCTTACTTGTACCAGAAGCAATCATGGGGTGTTTTGGTGGCGATTTTGGATGGCGGCGATGTCCAAGAACATGGGAAGGATACCATAGGAAGGTTGGTGAATGAGAAGATTGAGAGCTTCTTGAAGTGTTTGAATGAGGTTTGTGAGAGGCATATAAGAGGTGGTTATAGCATACCGGATTTAGATTTGCGAGAACAGATGAGAGAATCGACTATGAAGCTCGTTGTGCCAGCTTATGTTGAGTTCTTGGAATCTTACTCTGGATTCTTGCAGAGGAAAATATATCCGAGCCCCGACAAGTTGCGAGGGATGATCAGGAAGGCTTTTGATGGCGGTGAGTCGAGGCTATGGAGGCGCGGTTCGACTTCTAATGACCGGAATGCTGGACGGAATTCTGGCTCTATAGAGGGTGATATAAGAGATTTGAGAAGATCAAGGTCAGAGACTCAAAATTTTTGA 2193 0.4245 MAPLTPKSNNNDDPEENQALIKLESACSDLQSLLKGAETMEHNLVTMETRFDHLQGSLSNASRRITPLQSLAMSRKALETRINRAVSPALELIETFKVAESLQHRILDLSAKLSAERTQQKRLQKLLEYVDCVDRLNEAINSICQVGEGVILKLQEVVEFISRTKAADQYRTQRLREALATLKALYETEVDEMRFEGLLDQALLHMQDEFEAILLNKKHKNLGDMSQLTYDDDEKNNNDNNNELLVNNNSGAGCELGSELEVEVLRRISFTLAANDCLDICIDIYVKVRYRRAAKALMKLNPDYLKTYTPEGIDEMEWETLESAITLWTQHFQVAVKKVLQSEKSLCQRVLGTIMEGLVWPECFVKISDKIMAVFFRFGEGVARSSKEPQKLFKLLDMFESLERLKENVLETFEGESGVDICTRFRELEKLIIDASSKVFWEFGLQIEGNADGLPTPQDGSVPKLVRYAINYLKYLASDNYRTAMAKVLRTEQIWKNGILSKQETDESLLKNAISNVMEALQRNIESKRSRCRDKILVQVFLMNTYWYIYMRTKNTELGELLGDQYMKIGYKTVAEESAYLYQKQSWGVLVAILDGGDVQEHGKDTIGRLVNEKIESFLKCLNEVCERHIRGGYSIPDLDLREQMRESTMKLVVPAYVEFLESYSGFLQRKIYPSPDKLRGMIRKAFDGGESRLWRRGSTSNDRNAGRNSGSIEGDIRDLRRSRSETQNF 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241726g00002 730 MobiDBLite consensus disorder prediction 695 709 - -
Stsc241726g00002 730 Coils Coil 511 531 - -
Stsc241726g00002 730 PANTHER EXOCYST COMPLEX PROTEIN EXO70 82 687 IPR004140 GO:0000145|GO:0006887
Stsc241726g00002 730 Gene3D Exocyst complex component Exo70 157 697 - -
Stsc241726g00002 730 MobiDBLite consensus disorder prediction 694 730 - -
Stsc241726g00002 730 SUPERFAMILY Cullin repeat-like 173 688 IPR016159 -
Stsc241726g00002 730 MobiDBLite consensus disorder prediction 714 730 - -
Stsc241726g00002 730 Pfam Exo70 exocyst complex subunit 328 683 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241726g00002 Stsc-Chr241726 22481 26583 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241726g00002 50 670 EXO70 exocyst subunit family AT4G31540 27.969 2.44e-71 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241726g00002 - - ahf:112697742 1009.21