Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc241725g00021 | ATGTTGTCTTCATGGAACCTCTCAAATAAAACAAGTCCATGCAATTGGAATGGCATCAAATGTAACAATGGTGGAAGTGTTGTTGAGATAAAGCTTCCAAATTCAGGCCTAGATGGAACCCTCAACAGGTTTGATTTCTCTTCTTTTCCTAATCTCACCACACTCAATCTCAACATGAACAACCTTGTTGGAAAAATCCCATCTGAGATAGCAAACTTGACAAATTTGCAAGTTCTTGATCTTAGTAGCAACAATTTCACATATCAAATGCCACCAGAAATAGGTAACCTCTTAGAGCTGCAAGTTCTAATCCTATCAAACAATTCACTGTTGCAACAAATTCCATATCAAGTTAGCAATTTGCAGAATCTAAGGATTCTTGAACTAGGTGGTAACTATCTAGAGAATCCTGACCCAAAATTCAAGGGCATGGCATCCATAACAGACCTTAACCTCACATACAACTCTCTCACAGAATTTCCACCGTTTGTTTTTGAATGCCCAAAGCTTGTATCTCTTGATCTTTCAATGAACACTATTGGGAAAATTCCAATTCAATTGTTCAACACTCTCAAGAAACTTACAAACCTTGTCCTTACACAAAACCAATTAGAGGGGCCAATTCCAACAGATATTAAGAATCTTTCAAAGCTTAAACAACTAAGTCTTGGACTTAACCTGCTAAATGGTACAATACCAAAGGAGATAGGTCTATTGTCATCACTTGAGATTCTTGAATTGCATGGAAATTCCTTGCAAGGACCAATACCATCTTCAATTGGAAATCTTACAATGCTTCAGAGATTGGATCTTGATGGCTCAGGGGTAAATTCTAGCATTCCAGATGAAATAGGCTTCTGCAGAAACCTTACTTTTATCGGTATGTCCAAGAATAACCTCACAGGTTCCATACCTCTTTCAATGGCTTCACTAACAAGAATCAAAGAGTTAGGACTATCTGATAACCATTTATCTGGAGAACTTCATCCATCTCTTCTTTCCAATTGGAAAGAAATCAGATCCTTGCAACTCCAACAGAATGATCTGTCAGGAAAACTTCCTCCTGAGATTGGTTTGCTTCAAAATCTTACTCTCTTGTACCTATACTCCAACAAGTTTTCTGGACCAATCCCACCAGAAATTGGAAACTTATCAAGCATAGAAGATCTTGAACTTCCCAACAACAATTTCAATGGTTCTATACCATCAACTATTGGAAAGTTGAAGAGCCTCACCGTGTTAGCACTGGCCACAAATCAACTCAGTGGAATCCTTCCTCCTGAAATAGGTGATTTGGAAAGCCTGCAATACCTGGACTTGAGTCAAAACAAGCTCATAGGATCTTTGCCCTCATCAATTGTCCGTTTGGAGAATCTCAATCTGCTTTATCTTCATGACAACCATTTCTCAGGAAGTATTCCACAAGATTTTGCACCTTCTTTGTTAAGCAATTTGACCTTTGCTAACAATAGCTTCTCCGGGAAGCTACCTTCAGGAGTATGCAGGGGAGGGAATCTTGTCTACTTAGCTGCCAATCAGAACAATCTAGAAGGTCCAATCCCAGAAAGCCTGAGAAACTGCACTGGACTAATCAGAGTTCGTCTTGAGAAGAACTCTCTTAGTGGAGATATCACGAATGCATTCGGCATATACCCGGATCTGAACTTCATTGATTTAGGACAAAATCAGCTTTCTGGTTTGTTGACAAGTAACTGGGGAAAGTGCAAAAGTCTCTCAAGTTTTAGCATATCTTCCAATAAGATACAAGGGAACATCCCTCCTGAGCTTGGAAGTTTGCCAAAGCTACAAAATCTTGATCTCTCCAACAACAATCTAACAGGAAGCATCCCAGTGAAGCTCTTCAGTCCATCTTCCAAGCTGCTTAAGCTGAACATGAGCAGCAACAATCTTTCGGGTCAGATACCGGCCAGCATTGGAGCACTTTCACAGCTGCAGGTTCTGGATTTATCAGAAAACAATCTGAGAGGGTCAATTCCAAAAGAACTTGGAAGCTGCAGAAGGCTTATATCACTGAAGTTGAGTATGAACCAGTTAGATGGGAATATGCCGGTTGAGCTCGGGAATTTAGTGGAGTTGCAGCCTCTGTTGGATCTCAGCCATAACTCACTGAGTGGACAGATAATCCCACAGCTCGGAAATCTGATAGCTTTGGAAGTTTTGAACCTGTCCCATAATCAGCTTTCTGGGGCAATTCCTTCTTCTTTGGAAGGACTAATAAGCCTTCAGTCAGTGGATATTTCCTATAACAAACTTGTAGGTCCCCTCCCGGACCTAACTGCTTTTCAAAATGCTTCTTCCGAAGCTCTAGTTGGCAATGCAGGTTTGTGTGATGGTACTGCTAGCAATAGCAAAGCAAATTTGAGTCCTTGTGTTGGAAGCAAAAGCAGCAAATCAAATAAGCATAAGGTGATCATTGCAGTAGTCATTCCACTTGCTGTTTTAGTCATTCTATTTGTTTCCCTTGGAGTCTTCGCCTTGCTGCGCTACAAGAGAGTCGATCAAGAAGAAGAGGACAAGAGTGAAGGTGGAAAGGACTCATTCTTTGTATGGAATCACAGGAGCATGGTAGAGTTTAAGGACATGCGCAAGGCAACTGAGAACTTTGGTGACAAGTACTGCATAGGCATAGGAGGACAGGGCAGTGTATACAAAGCAATGCTTCCAACAGGTGATGTCTTCGCAGTGAAGCGTCTCCACCAAAATGAGGATATAGACTTCTCCGGACACCAGACAAAGAATTTCATGTCTGAAGTTCATGCATTAACTAATATTCGCCACCGCAACATTGTAACAATGTGTGGTTTTAGTTACTCGGACGGGTCTATATTTTTCATATATGAGCATGTGGAGAGAGGCTCTTTGCTGAAGTTGTTGCAGGACGACGAGGAGGCGAAGATGTTGACCTGGGACATCAGGCTGAACATAATAAAAGGATTAGCAAATGCATTGTCTTACCTGCACCATGACTGCAAGCCAAGCATTGTTCACAGAGACATAACAGGAAACAACATTCTCTTGGACACTGATTATGAGCCTAAAATATCTGATTTTGGGACTGCAAGGTTGCTGAAAGAAGGAGAATCAAATTGGACAGCTCCTGCGGGATCATACGGCTATATAGCACCAGAGCTTGCATTTACCATGAAAGTGACAGAAAAATGTGATGTATATAGTTTCGGAATTGTTGCATTAGAGATTTTGGCAGGGAAGTACCCTCATGAACTGCTTTTGTGTCTAGAATCTGGGGGATTTGATCAACACCTTGTGGATTTCTTAGATAAGAGAATAGATCCTCCAACAAGAAATTCTATTCCACTCCTAGTATTGGTGGCAAGGATGATTCTAAAATGTGTTGACAAAGATCCTTTGGCAAGACCAACCATGCACCAAGTATCCCAAGAGCTTTCATCGTCTACTTGGTCATCTTCTGACCCATTGAGAATGATCAAATTGGAGAACTTACTAGACATGTAA | 3495 | 0.41 | MLSSWNLSNKTSPCNWNGIKCNNGGSVVEIKLPNSGLDGTLNRFDFSSFPNLTTLNLNMNNLVGKIPSEIANLTNLQVLDLSSNNFTYQMPPEIGNLLELQVLILSNNSLLQQIPYQVSNLQNLRILELGGNYLENPDPKFKGMASITDLNLTYNSLTEFPPFVFECPKLVSLDLSMNTIGKIPIQLFNTLKKLTNLVLTQNQLEGPIPTDIKNLSKLKQLSLGLNLLNGTIPKEIGLLSSLEILELHGNSLQGPIPSSIGNLTMLQRLDLDGSGVNSSIPDEIGFCRNLTFIGMSKNNLTGSIPLSMASLTRIKELGLSDNHLSGELHPSLLSNWKEIRSLQLQQNDLSGKLPPEIGLLQNLTLLYLYSNKFSGPIPPEIGNLSSIEDLELPNNNFNGSIPSTIGKLKSLTVLALATNQLSGILPPEIGDLESLQYLDLSQNKLIGSLPSSIVRLENLNLLYLHDNHFSGSIPQDFAPSLLSNLTFANNSFSGKLPSGVCRGGNLVYLAANQNNLEGPIPESLRNCTGLIRVRLEKNSLSGDITNAFGIYPDLNFIDLGQNQLSGLLTSNWGKCKSLSSFSISSNKIQGNIPPELGSLPKLQNLDLSNNNLTGSIPVKLFSPSSKLLKLNMSSNNLSGQIPASIGALSQLQVLDLSENNLRGSIPKELGSCRRLISLKLSMNQLDGNMPVELGNLVELQPLLDLSHNSLSGQIIPQLGNLIALEVLNLSHNQLSGAIPSSLEGLISLQSVDISYNKLVGPLPDLTAFQNASSEALVGNAGLCDGTASNSKANLSPCVGSKSSKSNKHKVIIAVVIPLAVLVILFVSLGVFALLRYKRVDQEEEDKSEGGKDSFFVWNHRSMVEFKDMRKATENFGDKYCIGIGGQGSVYKAMLPTGDVFAVKRLHQNEDIDFSGHQTKNFMSEVHALTNIRHRNIVTMCGFSYSDGSIFFIYEHVERGSLLKLLQDDEEAKMLTWDIRLNIIKGLANALSYLHHDCKPSIVHRDITGNNILLDTDYEPKISDFGTARLLKEGESNWTAPAGSYGYIAPELAFTMKVTEKCDVYSFGIVALEILAGKYPHELLLCLESGGFDQHLVDFLDKRIDPPTRNSIPLLVLVARMILKCVDKDPLARPTMHQVSQELSSSTWSSSDPLRMIKLENLLDM | 1164 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc241725g00021 | 1164 | Gene3D | Ribonuclease Inhibitor | 407 | 481 | IPR032675 | - | |
Stsc241725g00021 | 1164 | Pfam | Leucine rich repeat | 600 | 661 | IPR001611 | GO:0005515 | |
Stsc241725g00021 | 1164 | Pfam | Leucine rich repeat | 387 | 445 | IPR001611 | GO:0005515 | |
Stsc241725g00021 | 1164 | FunFam | Leucine-rich repeat receptor protein kinase MSP1 | 838 | 955 | - | - | |
Stsc241725g00021 | 1164 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 | 479 | 798 | - | - | |
Stsc241725g00021 | 1164 | SUPERFAMILY | L domain-like | 328 | 567 | - | - | |
Stsc241725g00021 | 1164 | SUPERFAMILY | L domain-like | 524 | 784 | - | - | |
Stsc241725g00021 | 1164 | ProSiteProfiles | Protein kinase domain profile. | 875 | 1148 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc241725g00021 | 1164 | Gene3D | Ribonuclease Inhibitor | 142 | 331 | IPR032675 | - | |
Stsc241725g00021 | 1164 | Gene3D | Ribonuclease Inhibitor | 482 | 793 | IPR032675 | - | |
Stsc241725g00021 | 1164 | SMART | LRR_sd22_2 | 73 | 99 | - | - | |
Stsc241725g00021 | 1164 | SMART | LRR_sd22_2 | 360 | 392 | - | - | |
Stsc241725g00021 | 1164 | SMART | LRR_sd22_2 | 575 | 607 | - | - | |
Stsc241725g00021 | 1164 | SMART | LRR_sd22_2 | 432 | 461 | - | - | |
Stsc241725g00021 | 1164 | SMART | LRR_sd22_2 | 648 | 669 | - | - | |
Stsc241725g00021 | 1164 | SMART | LRR_sd22_2 | 191 | 217 | - | - | |
Stsc241725g00021 | 1164 | SMART | LRR_sd22_2 | 721 | 747 | - | - | |
Stsc241725g00021 | 1164 | SMART | LRR_sd22_2 | 121 | 146 | - | - | |
Stsc241725g00021 | 1164 | SMART | LRR_sd22_2 | 239 | 265 | - | - | |
Stsc241725g00021 | 1164 | Gene3D | Ribonuclease Inhibitor | 1 | 141 | IPR032675 | - | |
Stsc241725g00021 | 1164 | PRINTS | Leucine-rich repeat signature | 648 | 661 | - | - | |
Stsc241725g00021 | 1164 | PRINTS | Leucine-rich repeat signature | 602 | 615 | - | - | |
Stsc241725g00021 | 1164 | Pfam | Protein kinase domain | 880 | 1140 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc241725g00021 | 1164 | Gene3D | Transferase(Phosphotransferase) domain 1 | 956 | 1154 | - | - | |
Stsc241725g00021 | 1164 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 262 | 352 | - | - | |
Stsc241725g00021 | 1164 | FunFam | Probable leucine-rich repeat receptor-like protein kinase At5g63930 | 353 | 451 | - | - | |
Stsc241725g00021 | 1164 | Gene3D | Ribonuclease Inhibitor | 332 | 406 | IPR032675 | - | |
Stsc241725g00021 | 1164 | ProSiteProfiles | Leucine-rich repeat profile. | 601 | 623 | IPR001611 | GO:0005515 | |
Stsc241725g00021 | 1164 | FunFam | Os07g0541700 protein | 956 | 1041 | - | - | |
Stsc241725g00021 | 1164 | SUPERFAMILY | L domain-like | 12 | 326 | - | - | |
Stsc241725g00021 | 1164 | Pfam | Leucine rich repeat N-terminal domain | 2 | 22 | IPR013210 | - | |
Stsc241725g00021 | 1164 | Pfam | Leucine Rich repeats (2 copies) | 50 | 85 | IPR025875 | - | |
Stsc241725g00021 | 1164 | Pfam | Leucine Rich repeats (2 copies) | 724 | 765 | IPR025875 | - | |
Stsc241725g00021 | 1164 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 29 | 158 | - | - | |
Stsc241725g00021 | 1164 | FunFam | Nuclear pore complex protein NUP107 | 1 | 140 | - | - | |
Stsc241725g00021 | 1164 | SMART | LRR_typ_2 | 168 | 190 | IPR003591 | - | |
Stsc241725g00021 | 1164 | SMART | LRR_typ_2 | 408 | 431 | IPR003591 | - | |
Stsc241725g00021 | 1164 | SMART | LRR_typ_2 | 144 | 167 | IPR003591 | - | |
Stsc241725g00021 | 1164 | SMART | LRR_typ_2 | 121 | 143 | IPR003591 | - | |
Stsc241725g00021 | 1164 | SMART | LRR_typ_2 | 215 | 239 | IPR003591 | - | |
Stsc241725g00021 | 1164 | SMART | LRR_typ_2 | 432 | 456 | IPR003591 | - | |
Stsc241725g00021 | 1164 | SMART | LRR_typ_2 | 263 | 287 | IPR003591 | - | |
Stsc241725g00021 | 1164 | SMART | LRR_typ_2 | 721 | 745 | IPR003591 | - | |
Stsc241725g00021 | 1164 | SMART | LRR_typ_2 | 49 | 72 | IPR003591 | - | |
Stsc241725g00021 | 1164 | SMART | LRR_typ_2 | 73 | 97 | IPR003591 | - | |
Stsc241725g00021 | 1164 | SMART | LRR_typ_2 | 311 | 335 | IPR003591 | - | |
Stsc241725g00021 | 1164 | SMART | LRR_typ_2 | 648 | 672 | IPR003591 | - | |
Stsc241725g00021 | 1164 | SMART | LRR_typ_2 | 360 | 384 | IPR003591 | - | |
Stsc241725g00021 | 1164 | SMART | LRR_typ_2 | 599 | 623 | IPR003591 | - | |
Stsc241725g00021 | 1164 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 | 193 | 261 | - | - | |
Stsc241725g00021 | 1164 | SUPERFAMILY | Protein kinase-like (PK-like) | 855 | 1142 | IPR011009 | - | |
Stsc241725g00021 | 1164 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 1001 | 1013 | IPR008266 | GO:0004672|GO:0006468 | |
Stsc241725g00021 | 1164 | Gene3D | Phosphorylase Kinase; domain 1 | 837 | 955 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc241725g00021 | Stsc-Chr241725 | 113060 | 116748 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc241725g00021 | 2 | 617 | Receptor kinase-like Gene Family | AT4G08850 | 34.887 | 6.09e-87 | 302 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Stsc241725g00021 | Pkinase | 9.7e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc241725g00021 | - | - | ccaj:109803789 | 1538.47 |