Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241724g00020 ATGGCATCTTCAAATTCGCCATGCGCAGCATGCAAATTTCTTCGAAGAAAATGCCAACCAGAGTGCGCTTTTGCACCATACTTTCCACCGGATCAGCCTCAGAAGTTCGCGAATGTTCATAGAATCTTTGGTGCAAGCAACGTCACAAAGCTTCTCAACGATTTACACCCTCACCAGCGCGAAGACGCAGTCAATTCCCTCGCCTACGAGGCGGAGATGCGTCTCCGCGACCCGGTGTACGGTTGCGTCGGCGTTATCTCTCTCCTTCAGCACCAGCTCCGGCAGCTTCAGATGGACCTTTACTGCGCTAAATCGGAGCTATCTCGGTACCAAAGTTTGAGCGTTACCGTCCACCACAATCTCATTGGTGGTGAATCTGCTGTCGTGGAATACCAGCATCAGCAGAATCAGAATAATAATAATCCTGCTGGTGCTGGAACCCGCGACAGCAGTAATCACTACCAACAAAGTAGTAATAACAACCCTCATCATCACCATCACCACCAATTCTTTCCGCAGCAGCAGATAGTAAGAAGTTTTGATGGAGGGAACAATTATGATGCGAGTCTCCTGGCTATGAACATCTCCGCTAGCTTAGGGCAGCTCAATCAGATTCAGCAGCATAGCGCGGCCGGTGGCGGCGATGACCGCCGCACCGTCAACAACCCTTCCTAA 675 0.5067 MASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLYCAKSELSRYQSLSVTVHHNLIGGESAVVEYQHQQNQNNNNPAGAGTRDSSNHYQQSSNNNPHHHHHHQFFPQQQIVRSFDGGNNYDASLLAMNISASLGQLNQIQQHSAAGGGDDRRTVNNPS 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241724g00020 224 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 164 - -
Stsc241724g00020 224 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Stsc241724g00020 224 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Stsc241724g00020 224 MobiDBLite consensus disorder prediction 136 170 - -
Stsc241724g00020 224 MobiDBLite consensus disorder prediction 136 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241724g00020 Stsc-Chr241724 129435 130109 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241724g00020 2 221 AS2 family AT1G65620 60.360 4.85e-80 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc241724g00020 LOB 3.3e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241724g00020 - - gmx:100819502 330.872