Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241723g00023 ATGATGATCGGAGGTGGCGGTGGTGGCGGTGTTACACCTAACAACCATGTGAAGAAAAGATCAAGAAAGAACAGCGGAATTGGCGGGAATGAGAATCAACCATTGTTACCAAAGTCTCATCATCAAGAAGATAATCATAATCATAATTATAATAACAATGGTGATTTTAAAGGAGCTTCATTCTCCAGTGCAGTTTTAAATTTATCAACCACAATTATTGGTGCTGGGATCATGGCATTGCCTGCAACACTCAAAGTCTTGGGGATGGTTCCTGGCCTTATTACCATCGTCTTCATGGCTTTCTTGACGGACAAGTCAGTCGAATTCATCATCCGATTTTCGCGCGCCAGCGGCATTACTTCTTATGGAGATCTCATGGGGGAAGCCTTTGGGAGATATGGAAAAGCTCTGCTGCAAATTAGTGTTATAATCAACAATCTTGGCATACTTGTTGTTTACATGATTATTATTGGTGATGTGTTGTCTGGAACATCATCAAATAAAGATCACCATTATGGAATACTTGAAGGATGGTTTGGTGTACATTGGTGGACGGGTCGAAAATTTGTTCTTCTTGTTACCACACTTTCTGTGATTCTTCCTTTGGTTAGCTTTAAGAGAATTGATTCGTTGAGTTTTACATCTGCAGTATCAATTGCACTAGCAGTTGTGTTTCTTGTAATTGCTGTGGGAATTGCAATTGTGAAGATCATTAGTGGAGGCATTGGAATGCCAAGACTCTTCCCAGTTATTAATGATTTGACAGATTTCTTTCAACTCTTCACTGTTGCTCCTATTCTTGTCACCGCCTATATATGCCACTACAACGTTCACAACATAGAAAACGAAATGGAGGACTCAACGGAAATGCATGGAGTTGTACGGACATCACTCGGAATGTGTTGTTCGGTGTACGTCTTAACAAGCTTCTTTGGCTTCCTGTTGTTTGGAGAAGAAACTCTTGATGATGTGGTTGCGAATTTCGACGCAGATCTTGGAATCCCATTCGGATCCGCCATTAACGACGCAGTTCGATTCAGCTATGCTGCGCACCTCATGCTTGTTTTTCCGGTTGTGTTTTTTCCGCTACGAATCAACGTTGATGATTTGATCTCTTATTCATCATTGCTGTCATCGTCGTCGTGGTCAAGGCCTTCTTTGCTTCAAGATAACTTGAGATTTACGTCAATTACAGTTTCTCTTCTTCTTCTAATATTCGTTGTCGCAAACTTCATTCCTACTATTTGGGACGCTTTTCAGTTCACCGGAGCAACCGCCACCGTTTTTGTTGGATTTATCTTCCCAGCTGCCGTCACTCTTAGGGATAGATACGACATAGCAACCAAACAAGACAAGATTCTTTCAGTTATGATGATGATATTGGCAGTATTCTCAAATGCTATGGCTATATACAGTGATGCTGTTGCCTTGGTCAATAAGGATAAAACCAAAACTTTACGTGAGTGA 1467 0.4097 MMIGGGGGGGVTPNNHVKKRSRKNSGIGGNENQPLLPKSHHQEDNHNHNYNNNGDFKGASFSSAVLNLSTTIIGAGIMALPATLKVLGMVPGLITIVFMAFLTDKSVEFIIRFSRASGITSYGDLMGEAFGRYGKALLQISVIINNLGILVVYMIIIGDVLSGTSSNKDHHYGILEGWFGVHWWTGRKFVLLVTTLSVILPLVSFKRIDSLSFTSAVSIALAVVFLVIAVGIAIVKIISGGIGMPRLFPVINDLTDFFQLFTVAPILVTAYICHYNVHNIENEMEDSTEMHGVVRTSLGMCCSVYVLTSFFGFLLFGEETLDDVVANFDADLGIPFGSAINDAVRFSYAAHLMLVFPVVFFPLRINVDDLISYSSLLSSSSWSRPSLLQDNLRFTSITVSLLLLIFVVANFIPTIWDAFQFTGATATVFVGFIFPAAVTLRDRYDIATKQDKILSVMMMILAVFSNAMAIYSDAVALVNKDKTKTLRE 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241723g00023 488 Pfam Transmembrane amino acid transporter protein 58 475 IPR013057 -
Stsc241723g00023 488 PANTHER AMINO ACID TRANSPORTER 49 465 - -
Stsc241723g00023 488 MobiDBLite consensus disorder prediction 1 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241723g00023 Stsc-Chr241723 123092 126337 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241723g00023 17 484 Amino Acid or Auxin Permease AAAP Family AT3G30390 59.488 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241723g00023 K14207 - gmx:100795222 610.912