Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241723g00021 ATGCAAGAAGCATCCCTCAATAATAATTACTATTTACTCCCTAATATTAATAATAATACAAATTTAAACCCATCTCCATACCCAACAACAATTCAAAACAACAATAACAACACTACTACTCATCATAATTACCAAAGTTTCTTGAACCAAATATATGGGAATTTACAAAACTATCCTCAGCAATTGTTCTCAGCTGACTTCATAATAAGCAGCCCTCCTCAGAGCAGCAACTCAACGTCGGACGAAGCAGAGGAGCAGCAGCTGAGCCTGATCAACGAGAGGAAGCACCGGCGAATGATATCGAACCGTGAGTCGGCTCGGCGATCGAGGATGAGGAAGCAGAGGCACCTGGACGAGCTGTGGTCACAGGTGGTGTGGCTAAGGAACGAGAACCACCAGCTCATGGAGAAGCTCAACCATGTCTCTGACTGCCATGAACAAGTTCTTCAAGAAAATGCTCAGCTCAAAGAAGAAGCTTCAGAGCTTCGTCAGATGCTCAGTGACATGAAGATTCATAGCCCTGCTTCTTCTTCTTTCCCTCCTCAAATTCTTCCTTTGGATCATGATCTTCCTTCTTCCTCATCAAACCAATCTGTTTCAACTTCTATGGATCTTATTGCTTAA 624 0.4295 MQEASLNNNYYLLPNINNNTNLNPSPYPTTIQNNNNNTTTHHNYQSFLNQIYGNLQNYPQQLFSADFIISSPPQSSNSTSDEAEEQQLSLINERKHRRMISNRESARRSRMRKQRHLDELWSQVVWLRNENHQLMEKLNHVSDCHEQVLQENAQLKEEASELRQMLSDMKIHSPASSSFPPQILPLDHDLPSSSSNQSVSTSMDLIA 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241723g00021 207 SUPERFAMILY Leucine zipper domain 94 144 IPR046347 GO:0003700|GO:0006355
Stsc241723g00021 207 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 97 112 IPR004827 GO:0003700|GO:0006355
Stsc241723g00021 207 MobiDBLite consensus disorder prediction 172 207 - -
Stsc241723g00021 207 MobiDBLite consensus disorder prediction 188 207 - -
Stsc241723g00021 207 FunFam BZIP transcription factor 92 143 - -
Stsc241723g00021 207 Gene3D - 92 148 - -
Stsc241723g00021 207 Pfam bZIP transcription factor 94 152 IPR004827 GO:0003700|GO:0006355
Stsc241723g00021 207 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 12 176 IPR044521 -
Stsc241723g00021 207 CDD bZIP_plant_GBF1 95 145 IPR045314 GO:0003700|GO:0006355
Stsc241723g00021 207 SMART brlzneu 90 154 IPR004827 GO:0003700|GO:0006355
Stsc241723g00021 207 Coils Coil 145 172 - -
Stsc241723g00021 207 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 92 155 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241723g00021 Stsc-Chr241723 87314 88103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241723g00021 75 187 bZIP Transcription Factor Family AT3G30530 71.304 1.21e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc241723g00021 bZIP_1 5.9e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241723g00021 - - aprc:113867865 220.32