Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241721g00015 ATGGCCTTAGAATCCCACAATAAGCAGCATCAGCTTCATTTTCTTTTAGTACCATTTTTGTCTCCTGGTCACCTCATTCCCATGGTAGACATAGCTAGGTTACTAGTAAACCATGGAGCTTTTGTCACAATCATCACCACCCCTCTTAACACCACACGAGTCAAGGTACTTATTGACACTGTCAATGTATCAAAATTACGAATTCAGGTTGTCCAATTTGAGATTCCAGTTCTCAAATTTGGATTGCCGGAAGGGTGTGAAAGCCTGGAGCTAGTTCCTTCGCGCGCCTTGATAAGAAACTTCGTGGTTGCTTTTAGCAAGTTGCAAACACCAATAGAAGAGTTGATTGAGAAGAAGAAGAAGATTGAATCAACCCCAATAAGTTGCATTCTAGCTGACAAATTCAACCATTGGATGGAAGATGTTGCTTTGAAGTTCCAAATCCCAAGGCTTATATTTGATGGTTCAAGTTGCATGAATCATCTGCTGTTGCACAATTTGTTCAAGTCAAAGGTTTATGAGAATGTCCAAGAATCAAAGCCTATTGTGGTGCCTAATTTGCCTCACAGAATTGAGTTAACAAAGTCACAACTTCCATTGGAATTGAATCCTGAAGCACAGGAGTTCAGAGATCTTAATGAAAAGATTAGAGCTTCAGAAGAATCAGCATATGGGGTTGTGATCAATAGCTTTGATGAATTGGAATTAGAGTATGTCAAAGAATACAACAAGGTTAAGGGTAACAGAGTTTGGTGCATTGGTCCTGTTTCATTATCCTACAATAATAATGATCATGTTGGTCAAAGAGGTAACAAATCCAAAATTGACATAGATTCTTGTATGAAATTTCTAGATTCATGGCCACCAAAATCAGTTGTTTATGTCTGTCTTGGCTCACTCAACAACCTAGCACTTGCTCAATTTCAAGAACTTGCTATGGCATTGGAATCATGCAATTTTCCATTCATTTGGGTGATGAAAGAAGATGATGCCACAAGAGAAGAGCTAACAAAGAAATGGTTATTGGAGAGTGAATTTGAAGAAAGGACAAAGGAAAGAGGACTCATAATCCATGGGTGGGCCCCACAAGTGTTGATATTCTCACATGATGCTATTGGTGTGTTTCTAACACATTGTGGTTGGAACTCAACACTAGAAGCAATTTGTGGCGGTGTTCCAATGATAACTTGGCCTATGTTTGGTGACCAATTTTTCAATGAGAAATTGGTTGTGCAAATATTGTGTATTGGTGAAAAATTAGGGAATGAAATTGCTATCCCTTTGGGTAAGCAAGAGAATTATGGTGCTAATATTAAGAGGGAGACAATTGTGGAGGCAATAGAGAAAGTAATTGGAGATGGAGAGAATAAGGAAGAGAGAAGAGAAAGTGTTAGAAGGCTTGCTGAGCTGGCAAAGAAATCCATGGAACTTGGAGGATCTTCTTATGTTAACATGAAGATGCTACTTGAGGACAATCTTGTTGTGCAAGAAAGAAGCAACAATGAAGATTTCGTTTGGCAAAGTTTTGATTATCCAGGTGACACTCTCTTGCCTGGACAGAAGTTTGGAAGGAATCTAAAAACAGGACAGAATCATTTTCTAACCTCGTGGAACAGCTCGGATGATCCGTTTCCGGGTAGTTATACTTTACAATTCGATATCAACGGTTATCCTCAATTAGTCCTTAAAGAAGGCACATCCATAAGATTTCATGCCGGATCATGGGTATCCAGTGGAACACCACAATTGAAAGAAAACTCTGCCTTTAGATATATATCTGTTTCTAACGAGGAAGAGATATATTTCATGTATGAGCTTATCAATAGTTCAATCCTACATAGAGTTTTTCTAACGCCGGAGGGATTCATTGAGCGAAGCGAGTTGAATACAGACACCTGGAGTAGGACTAACTTGGCGAAGCTACCGGCGGATGATTGTGGAGCTTATTCAAGTTGTAACATAAACAACTATCCAATGTGTAGTTGTTTGGAGGGATTTGTGCAAGATGATGCTAAGAAGCAGCAAGGCTTATCAGATGGTTGTGTAAGAAGAACTTCAATGGACTGTTTTGGAGATGGGTTTTTGAAGTACTCAGGGCTGAAATTTCCAGACACAGAAAGATCATGGTTCAGTAGAAATATCAGCATTGAAGATTGTAAGATGCTGTGCTTGAAGAATTGTTCATGTATGGCGTATGCAGCTTTGGATATAAGTAAAGGTGCAAGTGGTTGTTTGATGTGGCTTGGTGATTTGAATGATATTAAAGATTTGAGTCCAGATTCTCTTCAAGATATTTACATAAGAATGGCTGCTACAGAACTAGGTGTAATATGTGATCAACATGAGGAAGATCTACAATTGCCTTTGTTTGATATGTCCAGAATTTCTTCTGCAACAAATAATTTTTCAACTGATAACATTCTGGGAAAAGGTGGCTTTGGTCCGGTATATAAGGGTGTCTTAAAGGACGGAAAAGAAATCGCAGTTAAGAGACTCTTACAGACTTCAAGCCAAGGAATCCAAGAGTTCAAAAACGAAGTTATGCATATTGCCAAACTTCAACATAGGAATTTGGTGAAACTCCTAGGATGTTCCATTTATGCAGAAGAAAGATTGCTTGTTTATGAATTTATGCCCAACAAAAGCTTGGACTACTTCATATTTGATGAAAAGAAGGGTATGTTACTAGATTGGACAAGGCGCTTTCACATTATCAATGGGATTGCTCAAGGCCTTCTTTATCTTCATCAAGATTCAAGACATAGAATAGTTCACAGAGATCTCAAAGCTGCCAATGTGTTGCTGGACGGTGAAATGAACCCAAAAATTTCAGACTTTGGACTAGCCAGAAGTTTTGGAGGGAACGAAACCAAAGCAAACACGCGACATGTTGTCGGAACATACGGATATTTATCACCAGAGTACATAATTGATGGAGTTTACTCAACAAAATCAGATGTATTCAGTTTCGGAGTTTTGGTGTTGGAAATAGTAAGTGGGAGTAGCAATAGAGGATTCATTCATCAAGATCACCGCTTTAATCTACTAGGACATGCATGGAAACTATTTATGGAAGAGAAAGGATCTGAAATAATTTTTGCTCCAATAAGAGATAATTCATCAAATTTATGTTCAATGCTAAGATCAATTCATGTGGGATTACTTTGA 3168 0.3838 MALESHNKQHQLHFLLVPFLSPGHLIPMVDIARLLVNHGAFVTIITTPLNTTRVKVLIDTVNVSKLRIQVVQFEIPVLKFGLPEGCESLELVPSRALIRNFVVAFSKLQTPIEELIEKKKKIESTPISCILADKFNHWMEDVALKFQIPRLIFDGSSCMNHLLLHNLFKSKVYENVQESKPIVVPNLPHRIELTKSQLPLELNPEAQEFRDLNEKIRASEESAYGVVINSFDELELEYVKEYNKVKGNRVWCIGPVSLSYNNNDHVGQRGNKSKIDIDSCMKFLDSWPPKSVVYVCLGSLNNLALAQFQELAMALESCNFPFIWVMKEDDATREELTKKWLLESEFEERTKERGLIIHGWAPQVLIFSHDAIGVFLTHCGWNSTLEAICGGVPMITWPMFGDQFFNEKLVVQILCIGEKLGNEIAIPLGKQENYGANIKRETIVEAIEKVIGDGENKEERRESVRRLAELAKKSMELGGSSYVNMKMLLEDNLVVQERSNNEDFVWQSFDYPGDTLLPGQKFGRNLKTGQNHFLTSWNSSDDPFPGSYTLQFDINGYPQLVLKEGTSIRFHAGSWVSSGTPQLKENSAFRYISVSNEEEIYFMYELINSSILHRVFLTPEGFIERSELNTDTWSRTNLAKLPADDCGAYSSCNINNYPMCSCLEGFVQDDAKKQQGLSDGCVRRTSMDCFGDGFLKYSGLKFPDTERSWFSRNISIEDCKMLCLKNCSCMAYAALDISKGASGCLMWLGDLNDIKDLSPDSLQDIYIRMAATELGVICDQHEEDLQLPLFDMSRISSATNNFSTDNILGKGGFGPVYKGVLKDGKEIAVKRLLQTSSQGIQEFKNEVMHIAKLQHRNLVKLLGCSIYAEERLLVYEFMPNKSLDYFIFDEKKGMLLDWTRRFHIINGIAQGLLYLHQDSRHRIVHRDLKAANVLLDGEMNPKISDFGLARSFGGNETKANTRHVVGTYGYLSPEYIIDGVYSTKSDVFSFGVLVLEIVSGSSNRGFIHQDHRFNLLGHAWKLFMEEKGSEIIFAPIRDNSSNLCSMLRSIHVGLL 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241721g00015 1055 Gene3D Glycogen Phosphorylase B; 4 281 - -
Stsc241721g00015 1055 SMART serkin_6 802 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241721g00015 1055 SUPERFAMILY Protein kinase-like (PK-like) 786 1019 IPR011009 -
Stsc241721g00015 1055 Gene3D Transferase(Phosphotransferase) domain 1 878 1052 - -
Stsc241721g00015 1055 FunFam Glycosyltransferase 281 476 - -
Stsc241721g00015 1055 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 878 1055 - -
Stsc241721g00015 1055 Pfam D-mannose binding lectin 484 537 IPR001480 -
Stsc241721g00015 1055 SMART ntp_6 689 769 IPR003609 -
Stsc241721g00015 1055 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 490 - -
Stsc241721g00015 1055 Gene3D Hepatocyte Growth Factor 687 770 - -
Stsc241721g00015 1055 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 485 1055 - -
Stsc241721g00015 1055 Gene3D Phosphorylase Kinase; domain 1 771 877 - -
Stsc241721g00015 1055 Gene3D Glycogen Phosphorylase B; 282 476 - -
Stsc241721g00015 1055 Pfam Protein tyrosine and serine/threonine kinase 804 1002 IPR001245 GO:0004672|GO:0006468
Stsc241721g00015 1055 Pfam S-locus glycoprotein domain 573 668 IPR000858 GO:0048544
Stsc241721g00015 1055 CDD GT1_Gtf-like 12 481 IPR002213 GO:0008194
Stsc241721g00015 1055 SUPERFAMILY alpha-D-mannose-specific plant lectins 481 543 IPR036426 -
Stsc241721g00015 1055 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 258 410 IPR002213 GO:0008194
Stsc241721g00015 1055 ProSiteProfiles Protein kinase domain profile. 802 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241721g00015 1055 Pfam PAN-like domain 691 754 IPR003609 -
Stsc241721g00015 1055 ProSitePatterns Serine/Threonine protein kinases active-site signature. 923 935 IPR008271 GO:0004672|GO:0006468
Stsc241721g00015 1055 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 768 877 - -
Stsc241721g00015 1055 ProSiteProfiles PAN/Apple domain profile. 689 770 IPR003609 -
Stsc241721g00015 1055 CDD PAN_AP_plant 685 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241721g00015 Stsc-Chr241721 116897 121150 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241721g00015 12 497 Glycosyltransferase AT2G36750 44.877 6.00e-138 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc241721g00015 Pkinase 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241721g00015 - - ahf:112705340 721.465