Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241721g00001 ATGTCGGGTGTGGGGCCCATATCTCAGGATTGGGAGCCAGTGGTGATTAGGAAGAAGGCACCAAACGCTGCGGCCAAGAAGGATGAGAAAGCTGTCAACGCTGCTCGCCGTGCCGGTGCTGAGATTGAAACCGTCAAGAAATCAAATGCTGGAACAAATAGAGCTGCCTCTAGTAGCACTTCTTTGAACACCAGGAAGCTTGATGAAGAAACCGAGAACCTTCACCACGAACGCGTACCAACTGAGCTAAAGAAAGCCATCATGCAGGCCCGTCTAGACAAAAAACTTACTCAGGCTCAGCTCGCTCAG 309 0.5113 MSGVGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSNAGTNRAASSSTSLNTRKLDEETENLHHERVPTELKKAIMQARLDKKLTQAQLAQ 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241721g00001 103 Gene3D - 71 103 IPR010982 GO:0003677
Stsc241721g00001 103 MobiDBLite consensus disorder prediction 46 64 - -
Stsc241721g00001 103 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 9 103 - -
Stsc241721g00001 103 MobiDBLite consensus disorder prediction 43 78 - -
Stsc241721g00001 103 Pfam Multiprotein bridging factor 1 9 79 IPR013729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241721g00001 Stsc-Chr241721 33 2202 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Stsc241721g00001 MBF1 1.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241721g00001 K03627 - jre:108984493 188.348