Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241719g00019 ATGTTCAAAAGAAGCAACAGTTTTGGAGCCATGAGGATGCTATGCTGGTGGGGGTTTGGGTTTGTAGGGTTAATGTTTGTGAAATTGGTACAAGGATTTGAGGATAGCAATGTGACAAACATGCTCTATTATAACAACAACAGACCTTTGATGGTTGGTCTCACTCTTATTTATGGTGCTGCTGCCAAAGGAGCTGTATGTCTGGATGGATCTTTACCGGGTTACCACTTCCACCGCGGATATGGCGCCGGATCAAACAGTTGGCTCATACAATTGGAGGGAGGAGGCTGGTGTGGAAATATCAGAAATTGCATTTATAGTAAGAAGACGCGGCATGGTTCATCGGCGTTTATGGAAAAACAGATACCGTTTGTTGGGATACTGAGCAACAAAGCTGAGGAAAATCCAGATTTCTACAATTGGAATAGAATCAAAATTCGTTATTGTGATGGTGCATCGTTCACTGGAGACAGTCAAAATGAGCGAGCAGGGTTGTATTTCAGAGGGCAACGCATATGGCTCGCTGCTATGGAAGATCTAATGTCGAAAGGAATGCGCTATGCCAAACAGGCTCTTCTATCTGGATGTTCTGCAGGAGGTTTAGCGACGATTCTACATTGTGACGAATTTAGAGAAATGTTCCCAAGAACCACAAGAGTAAAGTGCTTAAGTGATGCTGGATTGTTCCTTGACGCTGTTGATGTATCCGGTCATCGCAGTTTGAGGAATTTCTTTGGAAGTGTGGTTGCCTTACAGGGAGCGCAACGAAACCTTCCAAGAACTTGTACCAGTCGCCTCAATCCAATTCTGTGCTTTTTCCCTCAGCACTCAATTGCCAGTGTTAAGGCACCACTGTTTCTTCTCAATGCAGCTTATGATACTTGGCAGATTCAAGCCAGCCTAGCTCCGCCATCTGCTGACTATCATTGGAATTGGTATGATTGCAGAAAAAATTATGCTCGTTGCAGCGGGCCGCAGATGCAATATCTGCAAGGTTTTCGGAATCAGATGCTAAGAGTTGTAAGAAGATTCTCGAGGTCACGTAAAAACGGGTTATTCATAAATTCTTGTTTCGCTCATTGCCAGTCCGAAAGACAGGATACATGGTTTGCTCGCGACTCGCCTCATATCGGAAATAGAGGGATAGCACAATCTGTTGGAAACTGGTATTTCGACCGAGTTCAAGTTCAAGCCATTGGTTGTCCTTACCCTTGTGACAAAACCTGCCATAATTTGGTTTTCAACTGA 1248 0.4415 MFKRSNSFGAMRMLCWWGFGFVGLMFVKLVQGFEDSNVTNMLYYNNNRPLMVGLTLIYGAAAKGAVCLDGSLPGYHFHRGYGAGSNSWLIQLEGGGWCGNIRNCIYSKKTRHGSSAFMEKQIPFVGILSNKAEENPDFYNWNRIKIRYCDGASFTGDSQNERAGLYFRGQRIWLAAMEDLMSKGMRYAKQALLSGCSAGGLATILHCDEFREMFPRTTRVKCLSDAGLFLDAVDVSGHRSLRNFFGSVVALQGAQRNLPRTCTSRLNPILCFFPQHSIASVKAPLFLLNAAYDTWQIQASLAPPSADYHWNWYDCRKNYARCSGPQMQYLQGFRNQMLRVVRRFSRSRKNGLFINSCFAHCQSERQDTWFARDSPHIGNRGIAQSVGNWYFDRVQVQAIGCPYPCDKTCHNLVFN 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241719g00019 415 PANTHER NOTUM-RELATED 38 411 IPR004963 GO:0016787
Stsc241719g00019 415 Pfam Pectinacetylesterase 47 394 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241719g00019 Stsc-Chr241719 101412 105061 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241719g00019 51 414 Carbohydrate Esterase AT1G57590 69.780 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241719g00019 K19882 - gmx:100791571 737.258