Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241719g00018 ATGCTGCAGAGAGGAAGTAGAAGCAACAGTTTTGGAGCCATGAGGATGCTATGCTGGTGGGGGTTTGGGTTTGTAGGGTTAATGTTTGTGAAATTGGTACAAGGATTTGAGGATAGCAATGTGACAAACATGCTCTATTATAACAACAACAGACCTTTGATGGTTGGTCTCACTCTTATTTATGGTGCTGCTGCCAAAGGAGCTGTATGTCTGGATGGATCTTTACCGGGTTACCACTTCCACCGCGGATATGGCGCCGGATCAAACAGTTGGCTCATACAATTGGAGGGAGGAGGCTGGTGTGGAAATATCAGAAATTGCATTTATAGTAAGAAGACGCGGCATGGTTCATCGGCGTTTATGGAAAAACAGATACCGTTTGTTGGGATACTGAGCAACAAAGCTGAGGAAAATCCAGATTTCTACAATTGGAATAGAATCAAAATTCGTTATTGTGATGGTGCATCGTTCACTGGAGACAGTCAAAATGAGCGAGCAGGGTTGTATTTCAGAGGGCAACGCATATGGCTCGCTGCTATGGAAGATCTAATGTCGAAAGGAATGCGCTATGCCAAACAGGCTCTTCTATCTGGATGTTCTGCAGGAGGTTTAGCGACGATTCTACATTGTGACGAATTTAGAGAAATGTTCCCAAGAACCACAAGAGTAAAGTGCTTAAGTGATGCTGGATTGTTCCTTGACGCTGTTGATGTATCCGGTCATCGCAGTTTGAGGAATTTCTTTGGAAGTGTGGTTGCCTTACAGGGAGCGCAACGAAACCTTCCAAGAACTTGTACCAGTCGCCTCAATCCAATTCTGTGCTTTTTCCCTCAGCACTCAATTGCCAGTGTTAAGGCACCACTGTTTCTTCTCAATGCAGCTTATGATACTTGGCAGATTCAAGCCAGCCTAGCTCCGCCATCTGCTGACTATCATTGGAATTGGTATGATTGCAGAAAAAATTATGCTCGTTGCAGCGGGCCGCAGATGCAATATCTGCAAGGTTTTCGGAATCAGATGCTAAGAGTTGTAAGAAGATTCTCGAGGTCACGTAAAAACGGGTTATTCATAAATTCTTGTTTCGCTCATTGCCAGTCCGAAAGACAGGATACATGGTTTGCTCGCGACTCGCCTCATATCGGAAATAGAGGGATAGCACAATCTGTTGGAAACTGGTATTTCGACCGAGTTCAAGTTCAAGCCATTGGTTGTCCTTACCCTTGTGACAAAACCTGCCATAATTTGGTTTTCAACTGA 1257 0.4439 MLQRGSRSNSFGAMRMLCWWGFGFVGLMFVKLVQGFEDSNVTNMLYYNNNRPLMVGLTLIYGAAAKGAVCLDGSLPGYHFHRGYGAGSNSWLIQLEGGGWCGNIRNCIYSKKTRHGSSAFMEKQIPFVGILSNKAEENPDFYNWNRIKIRYCDGASFTGDSQNERAGLYFRGQRIWLAAMEDLMSKGMRYAKQALLSGCSAGGLATILHCDEFREMFPRTTRVKCLSDAGLFLDAVDVSGHRSLRNFFGSVVALQGAQRNLPRTCTSRLNPILCFFPQHSIASVKAPLFLLNAAYDTWQIQASLAPPSADYHWNWYDCRKNYARCSGPQMQYLQGFRNQMLRVVRRFSRSRKNGLFINSCFAHCQSERQDTWFARDSPHIGNRGIAQSVGNWYFDRVQVQAIGCPYPCDKTCHNLVFN 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241719g00018 418 Pfam Pectinacetylesterase 50 397 IPR004963 GO:0016787
Stsc241719g00018 418 PANTHER NOTUM-RELATED 41 414 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241719g00018 Stsc-Chr241719 100940 105245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241719g00018 54 417 Carbohydrate Esterase AT1G57590 69.780 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241719g00018 K19882 - gmx:100791571 735.717