Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241719g00014 ATGGCAGTTTTAGCAAAGATAACTTATCTTGTTCCCCTACTTCTTCTGGTAATTGTTGTTGAGGCCAAACATGTGAGCATCAAGAACATGCTAGGATCTGGGAAGAACATGAACCTGCATTGTCAATCCAAAGATACTGATCTGGGTGAGCATAACATAGCATATGGGGATGAGTTTGGGTGGGACTTCCATGACGACATTGTTGGAACCACACTCTTTTACTGTGACTTGCAATGGGAGAGAGTTCAGGAGTACCATTTTGATGCCTATGACTTCCACAGGGACTTCGTCCGATGCGGCGATGATGGGTGTTCATGGCTGATAGCTGCCGAAGGCATGTATGGTTCAAATAGCCAAACAGGGCTCTGGGAATTCATGTACTACTGGCCAAACTGA 396 0.4545 MAVLAKITYLVPLLLLVIVVEAKHVSIKNMLGSGKNMNLHCQSKDTDLGEHNIAYGDEFGWDFHDDIVGTTLFYCDLQWERVQEYHFDAYDFHRDFVRCGDDGCSWLIAAEGMYGSNSQTGLWEFMYYWPN 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241719g00014 131 Pfam Plant self-incompatibility protein S1 24 129 IPR010264 -
Stsc241719g00014 131 PANTHER - 21 119 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241719g00014 Stsc-Chr241719 84419 85040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241719g00014 25 129 Carbohydrate Esterase AT3G16970 33.333 7.45e-13 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241719g00014 - - gmx:102670225 197.208