Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241719g00013 ATGGCTACACCAAATCCACAAGCAGGTGCAGCAGCAGCAGTGATATGTCCAGCACCAATGAAGGCCACGTCCAATGGGGCTTTCCACCATGAAAATCCTCTTGACTATTCTCTTCCATTGCTGATTGTTCAAATATGTGTCGTTGTTGGCTTCACTAGACTCCTTGCATTCATTTGCAGACCTCTTAGACAGCCTAGAGTTATTGCAGAGATCATCGGAGGATTACTGCTAGGACCATCTGCATTTGGAAGAAACCAGAAGTTTCTAGACACAATTTTCCCAAAGAAGAGCTTAACAGTTCTTGACACCATAGCCAACGTGGGTCTCTTGTTCTTCTTGTTTCTCGTTGGTCTTGAGCTTGATGTCCGTTCCATTAGGCGCACTGGTCCAAAGGCCTTAGCCATTGCAGTGTGTGGCATCACTTTCCCTTTCATTCTCGGCGTTGGAACCTCTTTTGTTCTCAGAGCAACCATCTCCAAAGGTGTTCAGCCACTCGCCTTCATTGTCTTCATGGGAGTTGCTCTCTCCATCACTGCCTTCCCCGTCTTGGCTCGAATCCTCGCGGAGCTCAAGCTTCTGACAACTGATGTAGGAAGCATTGCCATGTCTGCTGCTGCTGTGAATGATGTTGCAGCATGGATTCTCTTAGCACTTGCAATAGCTATATCCGGTGAAAACACTTCACCACTCATATCTGTTTGGGTTATGCTCTGTGGTGCTGCTTTTATAGTCTTTGCTGTGTATGCCATAAGGCCGTTGTTGGTGATAATGGCGAAGCGTTCGCTATCAGGGGAGCCTGTAAAAGAGACATACATTTGCTTCACCTTGACATTGGTTTTGGCTTGTAGCTTTCTGACTGATACAATTGGTATCCATGCTCTGTTTGGTGCATTTGTGGTTGGAATAATTGTCCCAAAAGATGGGCCTTTTGCTGGGGTTTTGATTGAGAAGATTGAAGACTTGGTGAGTGGGATTTTCTTGCCACTATATTTTGTGTCTAGTGGGTTGAAGACAAATGTGGCTACTATTAGTGGAGGAACTTCTTGGGCATTGCTTGCACTTGTCATATTCAATGCTTGCTTTGGAAAGATTGTTGGGACTATTGTGGTGGCAGTATCATGTAAGGTGCCTTTTAGAGAATCATTGGCACTTGGATTTCTCATGAATACTAAGGGTTTGGTTGAGCTCATTGTTCTCAACATTGGAAAAGATCGAAAGGTGTTGAACGACCAAGCATTTGCAATCTGTGTTCTGATGGCACTATTCACAACCTTCATCACAACCCCAATAGTGATGGCAGTGTACAAGCCAGCTCGCAGAGGAGCACCATACAAATACAAAACAATCCAGCGCAAGGATCTTGACACAGAGCTCAGAATGCTTGCATGCTTCCACAGCACGCGAAGCATCCCAACTCTCCTCAACCTCATCGAATCTTCCCGCGGAACCAAGAACTCAGGCAAGCTTTGCATCTACGCCATGCACCTTATGGAGCTCTCAGAGCGCTCCTCCGCCATCACTATGGTCCACAAGGCCCGCAGGAACGGCCTTCCTTTCTGGAACAACAAATCCGACAACGACCGCAACGGAAACAACGACCACATGATCATTGCCTTTCAGGCTTATGGAAAACTCAACAAGGTTAATGTTCGTCCCATGACTGCTATCTCTGATCTCACTAACATCCATGAAGATATCTGCACTAGCGCTCATCAAAAGCGTGCTGCGATGATCCTCCTTCCCTTCCACAAGCACCAACTCGTTGATGGATCCATGGAGTCCCTGGGAGGCTCGTTCCGTCACATGAACGAGCTTGTTTTGAGCCACGCTCCTTGCTCCGTCGGGATCTTGGTTGACCGTGGACTCGGCGGCGCGAGCCAGGTGCAAGCATCTGACGTGGCGTACAACATCGTTGTGTTGTTCTTCGGAGGACGTGATTGTCGGGAGGCGCTTTCTTATGGCATGAGGATGGCACAGCACCCGGGGATCTCACTCACGGCGGTTAAGTTTGTTGCGGCGTCCGGGAAGAGCCTCGCGTTCGGGGCGAAGCTCGTTGCGGTGTCGGCGGACAAGCAGCAGAAAGTGGTTACAGAGATCGATGAAAGTGAAAAGCAGTTAGACGAGGAGTTGTGGAAGGAGTTCTTGGGGAAGTCAGTCAAGTTTGAGGAGAGATTGGTGGAGAGCAGAAGCGATATTGAGGTTGCGTTGAGAGAGATGAGTAAGTCCAGCCTGATTTTGGTTGGTAGAATGCCATCGGTTGCGCCTTTGGTTTACAACAGTGATTCTGCTCAACTTGGACCTGTTGGAAGCTTCTTGGCTTCCTCTGAATTCTCAACTACTGCTTCTGTTGTTGTAATTCAACAGTATAATCCAGCTGCTGATGCTCACCCACTCGTCATGGAGGAAATTGAACACTCGGAGGAGCCAGATACACCCATCTAA 2442 0.4808 MATPNPQAGAAAAVICPAPMKATSNGAFHHENPLDYSLPLLIVQICVVVGFTRLLAFICRPLRQPRVIAEIIGGLLLGPSAFGRNQKFLDTIFPKKSLTVLDTIANVGLLFFLFLVGLELDVRSIRRTGPKALAIAVCGITFPFILGVGTSFVLRATISKGVQPLAFIVFMGVALSITAFPVLARILAELKLLTTDVGSIAMSAAAVNDVAAWILLALAIAISGENTSPLISVWVMLCGAAFIVFAVYAIRPLLVIMAKRSLSGEPVKETYICFTLTLVLACSFLTDTIGIHALFGAFVVGIIVPKDGPFAGVLIEKIEDLVSGIFLPLYFVSSGLKTNVATISGGTSWALLALVIFNACFGKIVGTIVVAVSCKVPFRESLALGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVLMALFTTFITTPIVMAVYKPARRGAPYKYKTIQRKDLDTELRMLACFHSTRSIPTLLNLIESSRGTKNSGKLCIYAMHLMELSERSSAITMVHKARRNGLPFWNNKSDNDRNGNNDHMIIAFQAYGKLNKVNVRPMTAISDLTNIHEDICTSAHQKRAAMILLPFHKHQLVDGSMESLGGSFRHMNELVLSHAPCSVGILVDRGLGGASQVQASDVAYNIVVLFFGGRDCREALSYGMRMAQHPGISLTAVKFVAASGKSLAFGAKLVAVSADKQQKVVTEIDESEKQLDEELWKEFLGKSVKFEERLVESRSDIEVALREMSKSSLILVGRMPSVAPLVYNSDSAQLGPVGSFLASSEFSTTASVVVIQQYNPAADAHPLVMEEIEHSEEPDTPI 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241719g00013 813 Gene3D - 40 442 IPR038770 -
Stsc241719g00013 813 FunFam Cation/H(+) antiporter 15 40 442 - -
Stsc241719g00013 813 PANTHER CATION/H + ANTIPORTER 15 790 - -
Stsc241719g00013 813 Pfam Sodium/hydrogen exchanger family 47 430 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241719g00013 Stsc-Chr241719 78772 82157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241719g00013 16 807 Antiporter Super Family AT3G17630 68.726 0.0 1074
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241719g00013 K26731 - gmx:100815966 1209.51