Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241719g00010 ATGGCTTGTTTGAATCCTGAGTTGGAGCTTGGTGGTAGAGGAGAGCAAGGTTCTCATCTTGGTGATGATAATGTTGTTGTCAACAACAACAACATGGGTGATGATGCTTCTATGATGCATTTCCCTGCTAACTGGCCAATGCCATCATCTGGACTGAATGCATCAGCTCCAACTCAGTTTACCATCTTATTCAATGGCAACACTTTTGTCTATGATGGAATTTCTACGGAGAAGGTGCAAGAGATACTGCTTATTGCTGCTGCATATGCCAAGTCTGCTGAAGTGAAAGTTGGGACACAATCTTCCTTCACTCCACTAATTCCCACTCCCACAAGTAGCCCTTCTCCTGCTGCACAAAGAAACTCCACTAATAACTTGCCTTCAAAACAATCTCTATGCTTCCCTGCAGAAAAGAGTTCCATTTGCAGGCTTCAAGAATTTCCATTAGCACGTAGACAATCTCTTCAGAGGTTTCTTGAGAAGCGACGAGACAGGTTGTTTAGCAAAGCCCCTTATGGTTTCTCAAAAGACATGGCTGGCCAGCTGATAGAGAACAACTTCTATGATGAGAATAGTCAAGGAAACTTTTATGATGACAACAATAGTCCACAAGATTTTGCTTCTTAA 627 0.4242 MACLNPELELGGRGEQGSHLGDDNVVVNNNNMGDDASMMHFPANWPMPSSGLNASAPTQFTILFNGNTFVYDGISTEKVQEILLIAAAYAKSAEVKVGTQSSFTPLIPTPTSSPSPAAQRNSTNNLPSKQSLCFPAEKSSICRLQEFPLARRQSLQRFLEKRRDRLFSKAPYGFSKDMAGQLIENNFYDENSQGNFYDDNNSPQDFAS 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241719g00010 208 ProSiteProfiles Tify domain profile. 53 88 IPR010399 -
Stsc241719g00010 208 Pfam Jas motif 148 172 IPR018467 -
Stsc241719g00010 208 MobiDBLite consensus disorder prediction 106 129 - -
Stsc241719g00010 208 Pfam tify domain 55 87 IPR010399 -
Stsc241719g00010 208 SMART tify_2 53 88 IPR010399 -
Stsc241719g00010 208 MobiDBLite consensus disorder prediction 1 22 - -
Stsc241719g00010 208 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 48 173 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241719g00010 Stsc-Chr241719 68744 71053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241719g00010 57 172 Tify Gene Family AT5G20900 48.739 7.90e-24 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Stsc241719g00010 tify 4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241719g00010 K13464 - gmx:100306655 131.339