Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241717g00007 ATGGCGGCAAAAAGGTTTTTGGATGATTCTGATGATCGAGATCAAGATAAGCCAAACGACAAACGGATTAGATCTAACAGACCCACTTTTGCTTCGGTCATAACCGAAGTGGTTATGGTGAAAAACTTGCAAACCCTCTTCTCAGGCTTGGAACCTTTGCTCAAGAGAGTGGTGAGTGAAGAAGTTGAGAGAGCGATGAGACGATGCTATTCTTCATCATCAAGGTCCTTAACAAGGTCACCATCATTGAGAATCAAAGCATTTGACGAGGAGCAACCCTCATCAACCTTGCAACTCGTCTTCAGCAAGAGACTCTCCCTTCCAATCTTCACCGGAAGCCGAATCCTCGACTTCGAAGGCAACCCTATAAGCATACTTCTGATGGACAAGAGTACTGGTCAAATGGTTCCAACAAGCCTCCCAAACCCAATCAAGCTAGAACTCCTCGTCCTCGATGGCGATTTCCCCCCTTCTGATACCGACAACTCTTCTTCTTCTTCTATTTCTTGTGGTTGGAGTAGTGAACAATTCAATAGCCGAATAGTGAAGGAGAGAACTGGGAAGAGACCTTTGCTTGCCGGAGAGTTGAACCTCACCATGAGGGATGGCATTGCACCAACCGGGGACATTGAGTTCACTGATAATAGTAGCTGGATTCGGAGTCGGAAGTTCCGGGTTGCCGTTAGGGTGGCTCCGGGGAGTAACCACCATGGTCTCGCCATTCGGGAAGGCATGACTGAAGCATTTGTTGTCAAGGATCACCGTGGTGAATTGTACAAAAAACATCACCCACCAATGCTAAACGACGAAGTGTGGCGGCTAGAAAAGATTGGAAAAGATGGAGCTTTTCACAAAAAATTGAGCTCAGAAGGGATCAAAACAGTGCAAGACTTTCTCAAACTATCAGTTATTGATCCTCATAGGCTAAGAAAGATTTTGGGCATTGGAATGTCAGATAAAATGTGGGAAGTGACAATCAAGCATGCAAAGACTTGTGAAATGGGAAGCAAGATGTACATCTACCGAGGCTCTCATTTCACTATTTTTCTTAATCCTATTTGCCAATTAGTTAGAGCCGATATCAATGGACAAACATTTCCTACCAAAGATCTTACCAGCTTGAATAGGGCCTATATAGAGAAGTTGGTGAGAGAAGCATACAGTAGATGGCAAAACTTGGAGGAATTTGATGGGGTTTTGAATGATAATATTGCTTTGTTAACCCAAGGTGATGCAAATATGGAGCAATATCAAAATAATAATCATCCAGGTTCAGTGGTAACATATGATAGCAACGATTATTTTGGAGACAAATCAAGTGGCAGCTATGTACCAAGCAATAATAACAGCAACAAAGAAATGGGGTGCATGGAGTGGTCCCTGAATGATAGTAATCCAGGGTACACCACAGCATCATTCAGCAATGGATTTGGATATGGATTTTCATCAGGATCTCAATCGGACGGTGATATAACACCTACTTCAGGTTGTGTCATTGACGGGGCTCAAAGAAGGCATATTTAG 1524 0.4337 MAAKRFLDDSDDRDQDKPNDKRIRSNRPTFASVITEVVMVKNLQTLFSGLEPLLKRVVSEEVERAMRRCYSSSSRSLTRSPSLRIKAFDEEQPSSTLQLVFSKRLSLPIFTGSRILDFEGNPISILLMDKSTGQMVPTSLPNPIKLELLVLDGDFPPSDTDNSSSSSISCGWSSEQFNSRIVKERTGKRPLLAGELNLTMRDGIAPTGDIEFTDNSSWIRSRKFRVAVRVAPGSNHHGLAIREGMTEAFVVKDHRGELYKKHHPPMLNDEVWRLEKIGKDGAFHKKLSSEGIKTVQDFLKLSVIDPHRLRKILGIGMSDKMWEVTIKHAKTCEMGSKMYIYRGSHFTIFLNPICQLVRADINGQTFPTKDLTSLNRAYIEKLVREAYSRWQNLEEFDGVLNDNIALLTQGDANMEQYQNNNHPGSVVTYDSNDYFGDKSSGSYVPSNNNSNKEMGCMEWSLNDSNPGYTTASFSNGFGYGFSSGSQSDGDITPTSGCVIDGAQRRHI 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241717g00007 507 MobiDBLite consensus disorder prediction 485 507 - -
Stsc241717g00007 507 PANTHER OS02G0177800 PROTEIN 1 470 IPR012416 GO:0005516
Stsc241717g00007 507 Pfam Calmodulin binding protein central domain 266 332 IPR046830 -
Stsc241717g00007 507 MobiDBLite consensus disorder prediction 1 25 - -
Stsc241717g00007 507 Pfam Calmodulin binding protein-like N-terminal domain 97 254 IPR046831 -
Stsc241717g00007 507 MobiDBLite consensus disorder prediction 1 24 - -
Stsc241717g00007 507 Pfam Calmodulin binding protein C-terminal domain 337 396 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241717g00007 Stsc-Chr241717 33148 37854 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241717g00007 3 398 Calmodulin-binding Proteins AT5G57580 48.371 1.94e-118 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241717g00007 - - aip:107644281 863.603