Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241716g00017 ATGGAACCCAGCTATGGCGGGTTTCTCTCTCTGCTCTTTCCTTTCTTGCTGCTGAATTCCGTCCTTTTCACGGTGGAATCTCAGTGCAGCAAGGGTTGTCCACTAGCTCTAGCTTCCTACTACATGTGGCAAGGCTCCAACTTCACCTACGTTTCACAGATCATGAAATCAAACGTCCTCACCGACCCAAACGACATAGTCAACTACAACAAAGCAACGGTTCCAAACAAAGACAGTGTCCAAGCCTTCATAAGAGTCAACGTTCCGTTCCCCTGCGACTGCATCAACGGCGAGTTTCTTGGTCACACTTTCCAGTATGACATTCAGAGCGGCGACACGTACGAGCGTGTGGCCAGGAACAATTTCGCGAACCTAACCAACGTGAATTGGCTGAGGAAGTTCAACAGTTATCCACCGAATAATATTCCTGACACTGGAACCCTAAATGTTACCGTTAATTGCTCTTGTGGGAACAGACAAGTGGCGAATTATGGTTTGTTCATCACGTATCCGCTTAGGCCTGGGGATACCTTAGGGGCTGTGGCAAAGAATCAGAGTGTTGACCCTTACTTGATTCAGAGGTACAATCCCTCTGTCAATTTCAACCAAGGGAGTGGCCTTGTTTTTATTCCAGGAAAAGATCAAAATGGTAGCTTTGAGTTTTTGCCATCCAGTTCTGGAGGTCTTGCTGGTGGGGCTATTGCCGGCATAGCTGTCGGTATCATAGCTGCTCTTCTATTACTGGTTGTTGGTATATATTTTGGATATTTCAGGAAAAGGAAGATGCAGAGGGAGGAATTGCTCTCACAAGACTCCAAAGCAACCTTTGGACAAGATGGTAAAGATGAAACCTCTCGTAGTGCTGTACATGAAGCTTCAGGGCCTGGTGGGCCTGCTGCCATCACGGGCATAACAGTGGACAAGTCGGTGGAGTTTTCATATGAAGAATTAGCAACTGCCACAAATAACTTCAGTTTGGCTAATAAAATTGGTCAAGGTGGTTTTGGTGCTGTCTACTATGCAGAGCTGAGGGGAGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCAAAAGAATTTCTTGCAGAATTGAAAGTCTTGACACGTGTTCATCATCTTAACCTGGTGCGGTTGATTGGATATAGTATCGAGGGTTCGCTTTTCCTTGTGTATGAATACATTGAGAATGGAAACTTGAGCCAGCATCTCCGTGGTTCTGCAAGAGACCCGCTACCATGGGCTACCCGTGTTCAAATTGCGTTGGATTCTGCCAGAGGTCTTGAATATATTCATGAGCATACAGTGCCTGTTGCCGATTTTGGATTGACTAAACTGACAGAAGTTGGAAGCTCATCGCTTCCTACCGGTCGTCTTGTTGGAACTTTCGGATACATGCCTCCAGAGTATGCTCAATATGGGGATGTATCACCTAAAGTAGATGTGTATGCTTTTGGAGTAGTTCTTTATGAACTTATTTCAGCTAAGGATGCTATTGTCAAGACAGGCGAATCTGTTGCCGACTCAAAGGGCCTTGTGGCTTTGTTTGAAGAAGTTCTTAGTCAGCCAGATCCTACAGAAGATCTTTGCAAACTAGTGGATCCAAGGCTTGGGGAAAACTACCCTATTGATTCAGTTCGCAAGATGGCACAGCTAGCGAAAGCTTGTACACAAGACAATCCCCAACTGCGACCGAGTATGAGATCCATTGTCGTCGCCTTAATGACACTTTCTTCAACTACCGACGATTGGGATGTTGGCTCCTTCTATGAAAACCAAAATCTTGTGAATCTTATGTCAGGAAGATAG 1809 0.4538 MEPSYGGFLSLLFPFLLLNSVLFTVESQCSKGCPLALASYYMWQGSNFTYVSQIMKSNVLTDPNDIVNYNKATVPNKDSVQAFIRVNVPFPCDCINGEFLGHTFQYDIQSGDTYERVARNNFANLTNVNWLRKFNSYPPNNIPDTGTLNVTVNCSCGNRQVANYGLFITYPLRPGDTLGAVAKNQSVDPYLIQRYNPSVNFNQGSGLVFIPGKDQNGSFEFLPSSSGGLAGGAIAGIAVGIIAALLLLVVGIYFGYFRKRKMQREELLSQDSKATFGQDGKDETSRSAVHEASGPGGPAAITGITVDKSVEFSYEELATATNNFSLANKIGQGGFGAVYYAELRGEKAAIKKMDMQASKEFLAELKVLTRVHHLNLVRLIGYSIEGSLFLVYEYIENGNLSQHLRGSARDPLPWATRVQIALDSARGLEYIHEHTVPVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKDAIVKTGESVADSKGLVALFEEVLSQPDPTEDLCKLVDPRLGENYPIDSVRKMAQLAKACTQDNPQLRPSMRSIVVALMTLSSTTDDWDVGSFYENQNLVNLMSGR 602
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc241716g00017 602 FunFam PTI1-like tyrosine-protein kinase 3 438 588 - -
Stsc241716g00017 602 SUPERFAMILY Protein kinase-like (PK-like) 306 574 IPR011009 -
Stsc241716g00017 602 ProSiteProfiles Protein kinase domain profile. 324 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241716g00017 602 Pfam Protein kinase domain 436 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241716g00017 602 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Stsc241716g00017 602 Gene3D Phosphorylase Kinase; domain 1 309 394 - -
Stsc241716g00017 602 FunFam LysM receptor kinase 2 303 394 - -
Stsc241716g00017 602 MobiDBLite consensus disorder prediction 272 300 - -
Stsc241716g00017 602 Pfam Protein tyrosine and serine/threonine kinase 326 435 IPR001245 GO:0004672|GO:0006468
Stsc241716g00017 602 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 12 588 IPR044812 GO:0019199|GO:0045087
Stsc241716g00017 602 Gene3D Transferase(Phosphotransferase) domain 1 395 592 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc241716g00017 Stsc-Chr241716 101970 107493 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241716g00017 9 602 Receptor kinase-like Gene Family AT3G21630 56.960 0.0 685
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Stsc241716g00017 Pkinase 1.2e-12 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241716g00017 K13429 - gmx:100777781 942.954