Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241714g00008 ATGAATAATTCAAGAAGAAATTCATCATCATCATCGGAAAGAAAGAAGAAAGGTGGTGAAGGTGGTGAAGGTGATGAAGATGGTTTAGGGTTTAAAAGGAAACTCAGATTTTGGTTTGGTTGCATGGCACTCAGATCTAAACCAAAAGATTCAGATGATCATGGAGTAGAGGGAAAAAATGCTACCACATCATCAATTGCAAGCCATAATAATTCACCAATAACTGATCATGGAGCTGGTGAAATTACCACAATCACTACTACTACTAATGCTACTAGAATTGTAAGTGAAGAAGAAAGGGCTTATCCAAATCTTAGAAGCTTCAAATACAAAGACCTAAAGTTGGCAACAAGGAATTTCAAGAGAGAGCATTTTCTTGGAGAGGGAGGATTTGGAAGTGTCTACAAAGGATGGCTTAGTAGAGATGATGCTATGACTCCATCAAGACCTGCATTTGGCTTCCCTGTTGCTATCAAATCTCTTAACCAATTTGGTCTTCAAGGCCATCAAGAATGGCTTGCTGAAGTTAATTATCTGAGTCAGCTGCAGCATCCAAATTTGGTGAAACTGATTGGATTTTGCAATGAAGGTGATTATAGGCTGCTTGTTTATGAGTTCATGCCTCGTGGAAGCCTTGAATCCCATCTCTTTAGACGAGCAGTGGTGTTTCCGTGGTCCACAAGAATGAGAATAATGCTTGATGCTGCAAGGGGACTTGCTTATCTTCATGACAAGACTGAAAACAAGAATGCAGTCATTTTCCGTGATTTCAAGACTTCTAATATACTCTTGGATAGGGATTTGAATGCAAAACTATCCGATTTTGGTTTTGCAAAGGATGGACCTGAGGGAGACAGAACTCACATATCAACTAGAGTCATGGGAACACAAGGCTATGCTGCTCCTGAATATGTCATGAGTGGGCATCTAAGCGTGAAGAGTGACGTGTACAGCTTCGGAGTCGTAATGCTAGAGATGGTTACAGGAAGGAAGGTGATAGACAGGCTAAGGCCATATAATGAGATGAACTTGGTGAATTGGGCACTGCCCTTAATAATGGACAATCCAAGGAACTGCCACAATGTCCTTGTTGATCCAAGGCTTCATGGTCAATACTCTAAAAAGGCTTCAGTTAAGGCACTTAAGTTGGCCTCTCACTGCCTTCGCTTCAATCCTTCATTGAGACCTTCCATGGCTTCTGTTGTTCAAACCATTGCCAACTTCCCTCAGGAGGCTTCACCTCTTCCAACTCCTCTTCCTTCTCCTCCTCATCCTCGTCATCGTACAACAACAACTACCACCATTAATAATAGTAACCAGCACAACAAATATGGTCTTGTTCTTCCTTCTTCTGGTGCTTCTGCTTCTGGTTCTGGTTCTACTTCGAGGAACAACAATGTGCCGAGTCGGTTCCGGGCTTCCCCGTACCACCCCAACAATATGCACCAACACCAACACCAACACCAACCTCATGTTGCTGTTGCTTCAACTTCATCATCAACACCAAGGCCTAATTCTAGAATTCATCAAAGGCGTTGA 1539 0.4237 MNNSRRNSSSSSERKKKGGEGGEGDEDGLGFKRKLRFWFGCMALRSKPKDSDDHGVEGKNATTSSIASHNNSPITDHGAGEITTITTTTNATRIVSEEERAYPNLRSFKYKDLKLATRNFKREHFLGEGGFGSVYKGWLSRDDAMTPSRPAFGFPVAIKSLNQFGLQGHQEWLAEVNYLSQLQHPNLVKLIGFCNEGDYRLLVYEFMPRGSLESHLFRRAVVFPWSTRMRIMLDAARGLAYLHDKTENKNAVIFRDFKTSNILLDRDLNAKLSDFGFAKDGPEGDRTHISTRVMGTQGYAAPEYVMSGHLSVKSDVYSFGVVMLEMVTGRKVIDRLRPYNEMNLVNWALPLIMDNPRNCHNVLVDPRLHGQYSKKASVKALKLASHCLRFNPSLRPSMASVVQTIANFPQEASPLPTPLPSPPHPRHRTTTTTTINNSNQHNKYGLVLPSSGASASGSGSTSRNNNVPSRFRASPYHPNNMHQHQHQHQPHVAVASTSSSTPRPNSRIHQRR 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241714g00008 512 Gene3D Transferase(Phosphotransferase) domain 1 207 414 - -
Stsc241714g00008 512 CDD STKc_IRAK 126 405 - -
Stsc241714g00008 512 Gene3D Phosphorylase Kinase; domain 1 80 206 - -
Stsc241714g00008 512 MobiDBLite consensus disorder prediction 1 28 - -
Stsc241714g00008 512 PANTHER OS01G0588500 PROTEIN-RELATED 29 406 - -
Stsc241714g00008 512 MobiDBLite consensus disorder prediction 48 81 - -
Stsc241714g00008 512 ProSiteProfiles Protein kinase domain profile. 120 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241714g00008 512 MobiDBLite consensus disorder prediction 58 81 - -
Stsc241714g00008 512 FunFam Serine/threonine-protein kinase BIK1 86 206 - -
Stsc241714g00008 512 MobiDBLite consensus disorder prediction 9 28 - -
Stsc241714g00008 512 MobiDBLite consensus disorder prediction 426 505 - -
Stsc241714g00008 512 Pfam Protein kinase domain 121 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241714g00008 512 ProSitePatterns Protein kinases ATP-binding region signature. 126 159 IPR017441 GO:0005524
Stsc241714g00008 512 SUPERFAMILY Protein kinase-like (PK-like) 105 438 IPR011009 -
Stsc241714g00008 512 MobiDBLite consensus disorder prediction 410 512 - -
Stsc241714g00008 512 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 207 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241714g00008 Stsc-Chr241714 49970 55514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241714g00008 106 435 Glycoside Hydrolase AT3G07070 48.214 3.05e-100 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc241714g00008 Pkinase 6.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241714g00008 - - adu:107471145 606.675