Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241713g00011 ATGAAAGTAACAGAATCCGAAGGGGAAGCGGAGGGGGTGACGGTGACTGTGAGTGTGAGGGAGTGCATTCAAGTAATTTCGACGCTGCTCAAAGAAATCCCATCGATGGAGAGCTTCAAGGGAAAGTGGTCACTCATCGCAGCCACACTCACAAACCTTCAAACCCACCTCTCTGACTCAGACTTCCCAGCATCAAATCCACTCACCATTGATCTCCTCCGTTCTCTCTCCCAAACCCTCCAACAAGCACTCTCACTCGGACAACATTGCCACTCCCCCAACCCCCCCAACGGCAAGCTCAAGACACAGAGCGACCTCCACTCCCTCCTCGACAACCTCAACCGCCACCTCAACGACTCCACCATCCTCTCCCGCACCCATACCGACAACCAAGCCGCTCTCTCTACCAACCCCCGCGACTCTCTCAGATCCCAATCCAGGAACCTCATCACCCGCCTCCAAATCGGCACACCCGACTCCCGAAACTCCGCCATGGACTCCCTGCTTTCTCTTCTTCACGAGGACGACAAGAACGTCGTCATCGCGGTTGCGCAGGGTGTGGTCCCGGTGCTCGTCCGCACACTGGATCACTCCACCTCCTCTGAGCCAAAGGAAAAAGCCGTTGCGGCCATCGCCAGAATCTCAACCATAGACACCAGCAAGCCCGTCCTCGCCGCCGAGGGCTTGCTCCTCCTCAACCACCTCTTACGAGTCCTCGATTCCGGAAGCGGATTCGCAAAGGAGAAAGCCTGCATAGCGCTTCAGGCGCTGAGTTACTCGAAGGAGAACGCCAGGGCCATAGGCTCACGCGGCGGAATCTCGTCTCTCTTGGAGATCTGCCAAGCTGGCACCCCTGGCTCTCAAGCCTCCGCCGCCGGCGTTCTCAGGAATTTATCGCGGTTCGCCGAGATCAAGGAGAATCTCGTAGAAGAAAACGCTGTTTTCGTCCTCTTGGGTCTCGCTTCTTCCGGAACTGCGCTGGCGCAAGAGAACGCCATTGCCTGCCTCTGTGGTTTGATATCTGAGGACCAAAGCTTGAAGCTTTCGGTGGTTAGGGAAGGTGGGCTGGAGACATTGAAGAATTTCTGGGAGTCGGGTCGGAGCCCCGAGGTGGCAATTGATTTTCTGGGTCATCTCGCTTCGTGTTCGCGCGTGGCTGACGTTGTTGTCTCCGATGGGTTTGTTGTGCCGCGGTTGGTGGGAGCTTTGGGGTCCGGGGTTATGGCGGTTAGAGTTGCAGCAGGTAGAGCCGTATATGGTATGTGTTTGGAGAGCGCAAAAGCGAGGAAGGAGTTGGGTGAGTGCGGCGGTGTTAGCCCCCTTATAAAGATGCTGGTGGATGGGAAGAGCGCGGAGGAGAAGGAGGCGGGTGCGAAAGCATTGTCGGTGATGCTGATGCATGCAGGGAATCGGAGAGTGTTTGGGAAGGACGAGAGAGGGATTGTGAGTGCGGTTCAGCTGCTGAACCCTTCGGTGGTGGGTTTGGATAAGAGGTACCCGGTGGCATTGCTGGAATTGCTGGTTCATTCAAAGAAGTGTAAGAAGCAGATGGTTGCCGCTGGTGCTTGTGTTTACACTCAGAAGCTCGTGGAAATGGATGTCCATGGTGCCAACAAGTTACTAGAAAGCCTTGGTCGTGCCAAGATTTGGGGTGTTTTTGCCAGACCCTAA 1671 0.5577 MKVTESEGEAEGVTVTVSVRECIQVISTLLKEIPSMESFKGKWSLIAATLTNLQTHLSDSDFPASNPLTIDLLRSLSQTLQQALSLGQHCHSPNPPNGKLKTQSDLHSLLDNLNRHLNDSTILSRTHTDNQAALSTNPRDSLRSQSRNLITRLQIGTPDSRNSAMDSLLSLLHEDDKNVVIAVAQGVVPVLVRTLDHSTSSEPKEKAVAAIARISTIDTSKPVLAAEGLLLLNHLLRVLDSGSGFAKEKACIALQALSYSKENARAIGSRGGISSLLEICQAGTPGSQASAAGVLRNLSRFAEIKENLVEENAVFVLLGLASSGTALAQENAIACLCGLISEDQSLKLSVVREGGLETLKNFWESGRSPEVAIDFLGHLASCSRVADVVVSDGFVVPRLVGALGSGVMAVRVAAGRAVYGMCLESAKARKELGECGGVSPLIKMLVDGKSAEEKEAGAKALSVMLMHAGNRRVFGKDERGIVSAVQLLNPSVVGLDKRYPVALLELLVHSKKCKKQMVAAGACVYTQKLVEMDVHGANKLLESLGRAKIWGVFARP 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241713g00011 556 SUPERFAMILY ARM repeat 148 521 IPR016024 -
Stsc241713g00011 556 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 20 554 - -
Stsc241713g00011 556 SMART arm_5 425 466 IPR000225 GO:0005515
Stsc241713g00011 556 SMART arm_5 260 300 IPR000225 GO:0005515
Stsc241713g00011 556 SMART arm_5 382 423 IPR000225 GO:0005515
Stsc241713g00011 556 SMART arm_5 175 216 IPR000225 GO:0005515
Stsc241713g00011 556 Gene3D - 136 369 IPR011989 -
Stsc241713g00011 556 Gene3D - 370 544 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241713g00011 Stsc-Chr241713 78984 80654 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241713g00011 142 414 U-box Gene Family AT2G23140 30.797 4.70e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241713g00011 - - qsa:O6P43_030678 620.542