Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241712g00017 ATGATGCCAAGTGTTAATCCTGACCCGTGTGACAAAGATTCAGAGCCATTTGTTGAAGTTGATCCAACTGGTCGCTATGGCAGATACACAGAGCTATTAGGATCTGGTGCTGTGAAGAAAGTGTACCGTGCATTTGACCAAGAAGAAGGCATAGAAGTTGCATGGAACCAAGTGAAGCTGAGAAACTTCTGTGATGACCCTGCCATGGTGGATAGGCTTTACTCTGAGGTGAGGCTTCTGAGAAGCCTGGCTCACAAGAACATCATTGCACTTTACAGTGTTTGGAGGGATGAGAACAAGAACACACTGAATTTCATCACTGAGGTTTGCACAAGTGGGAATCTGAGGGAGTATAGGAAGAAGCATAAGCATGTTTCCATGAAAGCACTTAAGAAGTGGTCAAAGCAGATTCTCAGAGGGTTGAATTATTTGCACAATCATGAACCCTGTATCATCCATAGGGACTTGAATTGCAGCAATGTTTTTGTCAATGGGAATGTTGGCCAGGTTAAGATTGGTGACTTGGGTTTGGCTGCAATTGTGGAGAAGAACCATTCAGCACACTCGATCCTCGGCANNNNNNNNNNACCGGAATTCATGGCGCCGGAGCTATACGACGAGCACTACACAGAATTGGTGGACATATACTCATTTGGGTTGTGTGTATTGGAGATGGTGACGCTTGAGCTTCCTTATAGCGAGTGTGACAATGTTGCGAAGATCTACAGGAAGGTTTCTTCTGGTTTGAAGCCTGATGCATTGAACAAGGTTAAGGATTCAGAGGTGAAGGCGTTCATTGAGAGGTGCATTGCTCATCAACCAAAAGCAAGACCTTCTGCTTCTGAGCTTCTTAAGGATCCTTTCTTTGATGAACTTGAAGATGATGACGAAAACGAAGAATCTGATTTGTGA 912 0.4386 MMPSVNPDPCDKDSEPFVEVDPTGRYGRYTELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRNFCDDPAMVDRLYSEVRLLRSLAHKNIIALYSVWRDENKNTLNFITEVCTSGNLREYRKKHKHVSMKALKKWSKQILRGLNYLHNHEPCIIHRDLNCSNVFVNGNVGQVKIGDLGLAAIVEKNHSAHSILGXXXXPEFMAPELYDEHYTELVDIYSFGLCVLEMVTLELPYSECDNVAKIYRKVSSGLKPDALNKVKDSEVKAFIERCIAHQPKARPSASELLKDPFFDELEDDDENEESDL 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241712g00017 303 MobiDBLite consensus disorder prediction 288 303 - -
Stsc241712g00017 303 ProSiteProfiles Protein kinase domain profile. 27 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241712g00017 303 PIRSF TyrPK_CSF1-R 119 301 - -
Stsc241712g00017 303 PIRSF TyrPK_CSF1-R 27 131 - -
Stsc241712g00017 303 FunFam probable serine/threonine-protein kinase WNK9 110 295 - -
Stsc241712g00017 303 Coils Coil 289 303 - -
Stsc241712g00017 303 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 292 - -
Stsc241712g00017 303 SUPERFAMILY Protein kinase-like (PK-like) 21 290 IPR011009 -
Stsc241712g00017 303 Gene3D Transferase(Phosphotransferase) domain 1 110 295 - -
Stsc241712g00017 303 MobiDBLite consensus disorder prediction 281 303 - -
Stsc241712g00017 303 FunFam Probable serine/threonine-protein kinase WNK1 11 108 - -
Stsc241712g00017 303 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Stsc241712g00017 303 Pfam Protein kinase domain 31 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241712g00017 303 CDD STKc_WNK 25 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241712g00017 Stsc-Chr241712 100421 102388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241712g00017 11 292 MAP Kinase Kinase Kinase AT5G55560 81.206 5.84e-175 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Stsc241712g00017 Pkinase 1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241712g00017 K08867 - jre:108994268 496.508