Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241710g00022 ATGTTCTCTTCCACATATGATTCAAACCCTTTCCCTAACTTCCCTTCATCATCTTCTTCTTCATCTTACCCTAATAATAACAATAATAATACACTCCCTTTCTACATTGATCCTCACCACAACAATGATTTTGCAACCACACTCTTTCATCACCATCATGATCCATCATCATTACTTGTTTCTCCCTTCATACCTACTTCAACTGAACTTCCATTCCCATCATCAGCGGAAGAAGCTGTTGTTGTTGCAGCAATGCTTGATCAAGATGCTGCAGCAAGCAATGCCTGCTGCTATGGCGCCGCCGGAGGAGGACTAATCTACGGTGGTGGTGGTGGTGGTGGTGGTGGTGTTGGTGGGGGTGGTGTTCCCAATTTGCTGAGTCAAAAAGCGTTAGGGAGCAGCATAGGCACGAAGAAAGACAGGCACAGCAAGATTCACACATCTCAGGGTTTGAGAGACAGAAGAGTGAGGCTTTCAAGCGAGATAGCGCGCAAGTTCTTTGATCTTCAGGACATGCTGGAGTTCGACAAGCCCAGCAACACTCTGGAATGGCTCTTCACCAAGTCTGAGAATGCAATCAAGGAGCTAGCGAGGAGCAAACACAGCTGCAGCTTCAGCTCGGCCGGGGAGAAATGCTCCTGCTGTGAAAGTGATCAAGCAGGTGGAGGTGGTGGTGGTGGTGTTGTGGTGTTTGAGAAATCATCTATGGCGGGAAGCAGTGATTCTTGTTCGAAAGGGAGGAACAAGTTGAAGTGGACACAGAGAGAAGACGTTTGTGTTCAGACAAAGAAGGAGTCAAGGGATAAAGCAAGGGCAAGAGCAAGAGAAAGAACTTGTTACAAGATGAACAACAACAATGGAAGAGTAGTAACAGTGCAAGATTTGGAGGACAAAACCCCTGCTGCTGCACTGCAACAATTTGAGCCTTCTTGTGCTTCTGGAAGATGGCCTAATAATCCTCATCACATGCTTCAACAGCAACAGCAACAACAACAACCTTACTATAACCCTCATGCTTTTATTAACAATGTCATTGATGAATCTATCATGATTAAAAGGAACATGAATCGTGACCAAAACCTTATTTCCATCCCTAATAACAACAACAGCAGCAGCATTATTGTTGATGATGATGAGTACCAAAACCACTCGTCATCCTTCCTCTATTCAACTCCAAGTTGGGACACCAACGAAACAATTAATGGTTGCTCCAACTTTCGTGCAATGGCAGCCACCATGAATAATCTATCAACATGCTTCACGGACCAGTAG 1272 0.4497 MFSSTYDSNPFPNFPSSSSSSSYPNNNNNNTLPFYIDPHHNNDFATTLFHHHHDPSSLLVSPFIPTSTELPFPSSAEEAVVVAAMLDQDAAASNACCYGAAGGGLIYGGGGGGGGGVGGGGVPNLLSQKALGSSIGTKKDRHSKIHTSQGLRDRRVRLSSEIARKFFDLQDMLEFDKPSNTLEWLFTKSENAIKELARSKHSCSFSSAGEKCSCCESDQAGGGGGGGVVVFEKSSMAGSSDSCSKGRNKLKWTQREDVCVQTKKESRDKARARARERTCYKMNNNNGRVVTVQDLEDKTPAAALQQFEPSCASGRWPNNPHHMLQQQQQQQQPYYNPHAFINNVIDESIMIKRNMNRDQNLISIPNNNNSSSIIVDDDEYQNHSSSFLYSTPSWDTNETINGCSNFRAMAATMNNLSTCFTDQ 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241710g00022 423 ProSiteProfiles R domain profile. 264 281 IPR017888 -
Stsc241710g00022 423 ProSiteProfiles TCP domain profile. 138 196 IPR017887 -
Stsc241710g00022 423 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 137 368 IPR005333 GO:0003700
Stsc241710g00022 423 MobiDBLite consensus disorder prediction 1 24 - -
Stsc241710g00022 423 Pfam TCP family transcription factor 137 284 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241710g00022 Stsc-Chr241710 154020 155291 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241710g00022 137 286 TCP Transcription Factor Family AT1G67260 40.606 1.90e-24 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc241710g00022 TCP 7e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241710g00022 - - adu:110275773 504.982