Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241710g00001 ATGTCAAAGCTGTTGTCAAAGCACCTTCACCTCTGCTTCTTCAAGCTGAAACACCACACAACCATCCTCTCTCCCACACCCTCACCACCCTCCACACCCACCACCACCTCCAAGTCAACTACCTCCAACTACTTCTCCTCTTCATCCTCCTCCGACGATGTGGACCCACCGGACCTGGCCTCCCTCTTCGCCTCTGAGAGGTTCTTCTTCTCCTCGCCGGGCACATCCAACTCCATCATAGAGTCCCCCGACACGCGTGCCTCCATACCAAGCGGCGGAGTCAAGGTCCCTAAGTACTCCGTGGACCCTTACGTCGATTTCTTGCGCTCAATGCAAGAAATGATTGCTTCACGCAAGCAGACTTTGGATGTCTCCAAAGACTGGGAGTATCTCCATGACCTCCTCTTGTGCTACCTGGCTCTCAATCCATCTCACACCCACAGGTACATTGTTCGTGCCTTCACCGATCTTGTCGTTGACCTTTTGTCTTCGTCTTCATCATTGTCTTCACCGCCGGTGGTCAAATCCTCGTCTTGCCGGAGGCTCAAGAACCATCGCCGCCGGCATAGCTCCAGTTTCTCAGGACAGTTAGTGTAG 597 0.5377 MSKLLSKHLHLCFFKLKHHTTILSPTPSPPSTPTTTSKSTTSNYFSSSSSSDDVDPPDLASLFASERFFFSSPGTSNSIIESPDTRASIPSGGVKVPKYSVDPYVDFLRSMQEMIASRKQTLDVSKDWEYLHDLLLCYLALNPSHTHRYIVRAFTDLVVDLLSSSSSLSSPPVVKSSSCRRLKNHRRRHSSSFSGQLV 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241710g00001 198 MobiDBLite consensus disorder prediction 165 198 - -
Stsc241710g00001 198 Pfam Transcriptional repressor, ovate 100 161 IPR006458 -
Stsc241710g00001 198 ProSiteProfiles OVATE domain profile. 96 160 IPR006458 -
Stsc241710g00001 198 MobiDBLite consensus disorder prediction 24 55 - -
Stsc241710g00001 198 NCBIfam uncharacterized plant-specific domain TIGR01568 95 163 IPR006458 -
Stsc241710g00001 198 MobiDBLite consensus disorder prediction 33 55 - -
Stsc241710g00001 198 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 35 164 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241710g00001 Stsc-Chr241710 7094 8111 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc241710g00001 Ovate 1.7e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241710g00001 - - aip:107616734 249.595