Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241708g00005 ATGGGAGACGTGGCTAAGGACCTAACAGCAGGGACTATTGGAGGGGCAGCACAATTGATATGTGGTCACCCCTTTGACACCATCAAGGTCAAGCTCCAAAGCCAGCCTACACCACTCCCTGGTCAGGTTCCCAAGTATGCTGGTGCAATTGATGCTGTGAAGCAGACAATAGCAGCCGAAGGACCAAGGGGTTTGTACAAAGGTATGGGAGCCCCACTAGCTACTGTAGCCGCCTTCAATGCCGTCCTATTTTCAGTAAGGGGACAACTGGAGGCATTATTGAGGTCCGAGCCTGGTGTTCCTCTCACAGTAAACCAGCAGATTGTTTGTGGGGCCGGAGCTGGAGTTGCGGTTTCTGTTCTAGCTTGCCCCACTGAACTGATCAAATGCAGGTTGCAAGCACAAAGCGCTCTTGCTGGTTCTGGAGCTGCTGCTGTGGCCGTGAAATATGGAGGACCCATGGATGTGGCCAGGCATGTTCTTCGGTCAGAAGGAGGCGTAAAAGGTCTTTTCAAGGGCTTGGTTCCTACAATGGCGCGTGAAATACCTGGAAATGCTGCAATGTTTGGTGTATATGAAGCAACTAAGCAGTTACTCGCTGGAGGGCGTGATACCTCTGGACTAGGTAGAGGTTCTTTGGTAGTTGCTGGAGGCATGGCTGGAGCTTCCTTCTGGCTCATGGTATACCCAACTGATGTCATTAAGAGTGTGATTCAAGTAGATGATTACAAAAATCCAAAGTTTTCTGGTACAATTGATGCTTTCAGAAAGATTCGCTCTACCGAAGGGATCAAAGGACTGTATAAGGGTTTTGGTCCGGCGATGGCCCGAAGTGTTCCTGCAAATGCAGCTTGTTTCTTAGCATATGAGATGACAAGATCAGCTCTAGGATGA 894 0.4944 MGDVAKDLTAGTIGGAAQLICGHPFDTIKVKLQSQPTPLPGQVPKYAGAIDAVKQTIAAEGPRGLYKGMGAPLATVAAFNAVLFSVRGQLEALLRSEPGVPLTVNQQIVCGAGAGVAVSVLACPTELIKCRLQAQSALAGSGAAAVAVKYGGPMDVARHVLRSEGGVKGLFKGLVPTMAREIPGNAAMFGVYEATKQLLAGGRDTSGLGRGSLVVAGGMAGASFWLMVYPTDVIKSVIQVDDYKNPKFSGTIDAFRKIRSTEGIKGLYKGFGPAMARSVPANAACFLAYEMTRSALG 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241708g00005 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Stsc241708g00005 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 296 - -
Stsc241708g00005 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Stsc241708g00005 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
Stsc241708g00005 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Stsc241708g00005 297 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 2 296 - -
Stsc241708g00005 297 Gene3D Mitochondrial carrier domain 2 296 IPR023395 -
Stsc241708g00005 297 Pfam Mitochondrial carrier protein 4 94 IPR018108 -
Stsc241708g00005 297 Pfam Mitochondrial carrier protein 103 200 IPR018108 -
Stsc241708g00005 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241708g00005 Stsc-Chr241708 49077 50601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241708g00005 22 291 Antiporters AT1G79900 33.818 4.04e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241708g00005 K15109 - nnu:104610350 500.36