Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241707g00017 ATGAGGAAAGTTGCTATAGGAACAATTTTCTCATCAACAGACACAGTTTGTACACTGCAGGTTCTGCATCAAGATGAAACTCCATTACTATACAGCCTGGTGTTTGGGGAAGGAGTGGTAAATGATGCAACATCAGTTGTTCTGTTCAATGCCGTACAGAAGCTTGATGTTTCAAGACTTAGTGGCAGGACATTCCGGGTTATTGGAGATTTCTTGTATCTCTTCTCATCAAGCACTGCTCTTGGAGTATTTACTGGACTTCTGACAGCATATATCTTGAAAGCATTAAGTTTTGGCAGACATTCAAGTGTTCGTGAGATTTCATTGATGATGTTAATGGCCTACCTATCTTACATGTTGGCCGAGCTACTTGAATTAAGTGGAATCCTCACTGTATTCTTTTGCGGGATACTAATGTCACATTATGCATGGCATAATGTAACTGAAATTTCAAGAATCACAACCAGGCATGTGTTTGCGACAATATCGTTTATTGCGGAAACTTTCATATTTCTTTACGTGGGAATGGATGCACTTGACATTGAAAAGTGGAGGATGACCAAATTAAGTTCCGGAAGTTTGATAGGAATTTACAGTTGTTTAATCTTACTGATATTGGTTGGGCGGGCTGCGTTCGTTTTCCCACTCTCGGCTTTTGCAAATTACATGAGCAGGCGCGCCGAGAGGGCGTCGAGTATCACATTCAAACATCAGATCATTATTTGGTGGGCTGGTCTAATGAGGGGAGCAGTCTCAATCGCTCTTGCTTTCAAACAGTTCACATTCTCTGGTGTTACCTCTGATCCAGTGAATGCAACTATGATTACCAACACCATTATTGTTGTCCTTTTCACCACATTAGTGTTTGGTTTTCTAACGAAACCACTTATTAGGTACATGCTACCCCATAACAATAATGGAAGAAGAAGAAACACAAACCATGAAGAAGCAGGTACAGGGACAGGGACACCTGGTGAGGACTTGAATTTACCATTGTTATCATTTGAAGAATCAGCAGCAACAAACATAAGCCGTGCAAAGGAAAGTCTTTCAATGTTGATAGAGTCTCCAGTGTACACCATACATCATTATTGGAGAAAGTTTGATGATGCATACATGAGGCCTCTCTTTGGTGGACCCCACCACCATAACAACACTTCGCCATGCTAG 1170 0.412 MRKVAIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLDVSRLSGRTFRVIGDFLYLFSSSTALGVFTGLLTAYILKALSFGRHSSVREISLMMLMAYLSYMLAELLELSGILTVFFCGILMSHYAWHNVTEISRITTRHVFATISFIAETFIFLYVGMDALDIEKWRMTKLSSGSLIGIYSCLILLILVGRAAFVFPLSAFANYMSRRAERASSITFKHQIIIWWAGLMRGAVSIALAFKQFTFSGVTSDPVNATMITNTIIVVLFTTLVFGFLTKPLIRYMLPHNNNGRRRNTNHEEAGTGTGTPGEDLNLPLLSFEESAATNISRAKESLSMLIESPVYTIHHYWRKFDDAYMRPLFGGPHHHNNTSPC 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241707g00017 389 Pfam Sodium/hydrogen exchanger family 4 297 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc241707g00017 389 MobiDBLite consensus disorder prediction 304 327 - -
Stsc241707g00017 389 PANTHER SODIUM/HYDROGEN EXCHANGER 5 379 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Stsc241707g00017 389 Gene3D - 2 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241707g00017 Stsc-Chr241707 113882 118289 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241707g00017 4 385 Antiporters AT5G55470 70.235 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241707g00017 - - gmx:100813332 619.387