Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241707g00005 ATGCACAAGAGGCGCGCCACTGGTGGCAAGAAGAAGGTCTGGAGGAAGAAGAGAAAGTATGAGCTTGGAAGGCAACCAGCTAACACAAAGCTATCCAGCAACAAAACTGTTAGGAGGATTAGGGTTCGAGGTGGGAATGTAAAGTGGCGTGCTTTGAGGCTTGACACTGGGAACTACTCTTGGGGTAGCGAAGCTGTGACTCGCAAAACAAGGATTCTCGATGTGGTGTATAATGCATCCAACAATGAACTTGTTCGAACTCAGACTTTGGTCAAGAGTGCTATCGTCCAGGTTGATGCTGCACCTTTCAAACAGTGGTATCTCCAGCATTATGGCGTCGACGTTGGCCGCAAGAAGAAGGTTGCAGCCTCTGGCAAGAAGGAAGGGGAGGATGCTGAAGCTGCAACTGAGGAAGCCAAGAAGAGTAACCATGTCTTAAGAAAGTTGGAGAAACGTAAACAAAACCGGGTGCTAGATCCTCACATTGAAGAACAATTTGGAAGCGGTCGTCTATTGGCTTGTATCTCGTCCCGACCCGGTCAATGTGGTCGTGCTGACGGATATATATTGGAGGGAAAAGAGCTTGAGTTCTACATGAAGAAGCTTCAGAAGAAGAAGGGCAAGGGTGCTGCTTAA 636 0.4811 MHKRRATGGKKKVWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDVGRKKKVAASGKKEGEDAEAATEEAKKSNHVLRKLEKRKQNRVLDPHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241707g00005 211 ProSitePatterns Ribosomal protein S8e signature. 4 23 IPR018283 GO:0003735|GO:0005840|GO:0006412
Stsc241707g00005 211 FunFam 40S ribosomal protein S8 155 208 - -
Stsc241707g00005 211 NCBIfam ribosomal protein eS8 2 192 IPR001047 GO:0003735|GO:0005840|GO:0006412
Stsc241707g00005 211 Pfam Ribosomal protein S8e 2 190 IPR022309 -
Stsc241707g00005 211 CDD Ribosomal_S8e_like 2 190 - -
Stsc241707g00005 211 Gene3D - 155 206 - -
Stsc241707g00005 211 PANTHER 40S RIBOSOMAL PROTEIN S8 1 208 IPR001047 GO:0003735|GO:0005840|GO:0006412
Stsc241707g00005 211 FunFam 40S ribosomal protein S8 25 154 - -
Stsc241707g00005 211 Coils Coil 132 152 - -
Stsc241707g00005 211 Gene3D - 25 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241707g00005 Stsc-Chr241707 24493 26417 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241707g00005 1 199 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 83.920 1.69e-121 341