Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241706g00004 ATGGCTGGGATTTGTTGCGGTGTTGTTGGAGAGGGAGAGACTCCAAATCCAATTGAGCCAACTTCTTCACGGCCTTTATCTCGCCGGAGTTTGGACCTCTTGCCGTTGAAATACATTGCCGACATGGCAGTTCCACCGGCCGAGAGCAGCCGTAAGCGGCAGAAGCTGGATCTCTCTGCCTCTCCGGCGAGGGAGTGCGTGAACGCAGTTGAGAGTTCCGAATCAAGCGGTAGTAAACTCAAAGAAGAGCTTAACGCCAAGAATAAGGAATCAACAAAACACGAAGAAGCAAGTAGTAGTTCGGAAGTGGCAACGTTAATTCCCTCGGAGAAAAACGAGGTTGTTGAAGAGTGTCCCAAGTATGGAGTCACGTCGGTATGTGGCAGGAGGAGGGACATGGAAGACGCAGTTTCGGTTCGTCCCTCGTTCTGCCAAGTTCAAAACGGCACAAACAAAGACGATCAAAACGACGCGCCGTTTCACTTCTTTGGTGTATACGACGGTCACGGATGTTCACATGTAAATAACTCGAACACCTTGTGTGCACCATGGTGCGAGCTCCAAACACCACACTGCGACGCCGTCGGCTCCACTGCCGTCGTCGCCGTCGTCACGCCGGAGAAAATCGTTGTCTCCAACTGCGGCGATTCTCGCGCCGTTCTCTGCCGTAACGGTGTCGCCATCCCCCTCTCCTCTGATCACAAGCCCGATAGACCAGACGAGTTGCTCCGGGTCCAGAACGCCGGTGGGCGCGTGATCTATTGGGACGGTCCAAGAGTGCTTGGGGTGCTGGCCATGTCAAGAGCCATAGGTGATAATTATTTGAAGCCTTATGTGATTTCGGAACCGGAGGTGACGGTTACGGATCGGAGTGACGAAGACGAGTGTTTGATTCTGGCGAGTGATGGGCTTTGGGATGTGGTTTCTAACGACACGGCGTGTGGGGTGGTTAGGATGTGTCTTAAGGCGCAGAAGCCGCCGTCACCACCGGGGTCTCCGGGGAGGGATGTGGCGGCGGCGGCAGATGGATCCGATAAGGCGTGCTCGGACGCTTCGATTCTTCTGACGAAGCTGGCTTTGGCGAGGCACAGCTCCGACAATGTTAGCGTGGTGGTGGTTGATTTGAGGAGAGATCAACGTCAACAACAAAGTTGA 1155 0.5429 MAGICCGVVGEGETPNPIEPTSSRPLSRRSLDLLPLKYIADMAVPPAESSRKRQKLDLSASPARECVNAVESSESSGSKLKEELNAKNKESTKHEEASSSSEVATLIPSEKNEVVEECPKYGVTSVCGRRRDMEDAVSVRPSFCQVQNGTNKDDQNDAPFHFFGVYDGHGCSHVNNSNTLCAPWCELQTPHCDAVGSTAVVAVVTPEKIVVSNCGDSRAVLCRNGVAIPLSSDHKPDRPDELLRVQNAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTDRSDEDECLILASDGLWDVVSNDTACGVVRMCLKAQKPPSPPGSPGRDVAAAADGSDKACSDASILLTKLALARHSSDNVSVVVVDLRRDQRQQQS 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241706g00004 384 PANTHER PROTEIN PHOSPHATASE 91 375 IPR015655 GO:0004722|GO:0006470
Stsc241706g00004 384 MobiDBLite consensus disorder prediction 42 108 - -
Stsc241706g00004 384 FunFam Protein phosphatase 2C 50 186 383 - -
Stsc241706g00004 384 CDD PP2Cc 120 322 IPR001932 -
Stsc241706g00004 384 ProSitePatterns PPM-type phosphatase domain signature. 162 170 IPR000222 GO:0043169
Stsc241706g00004 384 MobiDBLite consensus disorder prediction 1 27 - -
Stsc241706g00004 384 MobiDBLite consensus disorder prediction 76 97 - -
Stsc241706g00004 384 SUPERFAMILY PP2C-like 119 376 IPR036457 -
Stsc241706g00004 384 Pfam Protein phosphatase 2C 189 367 IPR001932 -
Stsc241706g00004 384 SMART PP2C_4 108 373 IPR001932 -
Stsc241706g00004 384 ProSiteProfiles PPM-type phosphatase domain profile. 120 375 IPR001932 -
Stsc241706g00004 384 Gene3D - 114 178 IPR036457 -
Stsc241706g00004 384 Gene3D - 179 384 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241706g00004 Stsc-Chr241706 42977 44899 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241706g00004 1 384 PP2C-type Phosphatase Gene Family AT3G11410 54.670 3.61e-121 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241706g00004 K14497 - gmx:100776356 464.536