Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241705g00021 ATGGAGAGGGTTGTGGGAGGAAAGTACAAGATCGGTAAGAAAATTGGAAGCGGTTCCTTTGGTGAAATTTATATTGCTACAAATATTGAGACCTCTGAGATTGTGGCCGTCAAGATGGAGAACAAGAAGACCAAACATCCACAGCTGCTCTATGAGGCAAAGCTGTATAATCTTCTTCAAGGAGAAAGTGGTGTACCGAGTATGAAATGGTGCGGCATTGATGGCGACAATAATGTTCTGGTTATTGATCTTCTGGGACCGAGTCTTGAGGACCTTTTTGTCTATTGCGGGAGAAAATTTACGTTGAAAACGGTCTTGATGTTGGCTGATCAGATGCTTACGAGAATAGAGTACTTACATTCCAAGGGATATTTGCATAGAGACATTAAACCGGATAACTTCCTTATGGGTCTTGGGAGGAAAGCAACCCAGGTTTATATTATTGACTTTGGACTTGCAAAAAGATATAAGGACCTTAACACAAACAAACATATTCCTTACAGAGAGAATAAAAACTTAACAGGAACTGCACGTTATGCAAGTTGTAATACTCACATCGGAATTGAGCAAAGTCGTCGGGATGATTTGGAATCTCTTGGCTACGTTCTTATGTACTTCTTAAGAGGAAGCCTTCCCTGGCAGGGTCTGAAAGCTGTCACCAAAAAAGAAAAATATGACAGGATTTGTGAGAAGAAGTTGTCAACTCCCATCGAGATGCTTTGCAAGTCATATCCCGTGGAGTTCGCTTCTTACTTTCATTATTGCCACTCCTTGACATTTGATCAACTACCAGATTATGGATTCTTGAAGCGCTTGTTCCGTGATCTGTTCAATCGTGAAGGATATGATTCTGACAATTTGTTCGACTGGACCATTCTAAAGTATCAGCAGACACAACAGAGACAGAGACAGATACAAAATCAATCAGCTGTTTCAGCCGCTGTGCCTAGCAGTCTAGAACCCATGGCTATGGACAAGAGTACAGGAGTCAATGATTCAGCTCATGTAACTTCAACAAGACAGTTAGCGAATCAGAATCATGATCGTCCAAGTGCAACTGCACAGCCTAAACCATCTACTGCTCAAAATCATAGTTCCAAGAACCAGACTGAGAAACATAACGTGAGCAACGGTCCATCTACATCATCTGGCTTGCCAAAATCCTCTAAAGAAAATGTATCAAAAGCAGAAAAACACTTAGGAAGCTCAAACATTGCTCGCGTTTTTGGTAGTAATTCTCGTACTTCAAGCAGTTGGATTCCTTCACTACGCCGGATTTCTTCAGCCAAATAA 1293 0.413 MERVVGGKYKIGKKIGSGSFGEIYIATNIETSEIVAVKMENKKTKHPQLLYEAKLYNLLQGESGVPSMKWCGIDGDNNVLVIDLLGPSLEDLFVYCGRKFTLKTVLMLADQMLTRIEYLHSKGYLHRDIKPDNFLMGLGRKATQVYIIDFGLAKRYKDLNTNKHIPYRENKNLTGTARYASCNTHIGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAVTKKEKYDRICEKKLSTPIEMLCKSYPVEFASYFHYCHSLTFDQLPDYGFLKRLFRDLFNREGYDSDNLFDWTILKYQQTQQRQRQIQNQSAVSAAVPSSLEPMAMDKSTGVNDSAHVTSTRQLANQNHDRPSATAQPKPSTAQNHSSKNQTEKHNVSNGPSTSSGLPKSSKENVSKAEKHLGSSNIARVFGSNSRTSSSWIPSLRRISSAK 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241705g00021 430 Gene3D Transferase(Phosphotransferase) domain 1 1 347 - -
Stsc241705g00021 430 MobiDBLite consensus disorder prediction 340 430 - -
Stsc241705g00021 430 SMART serkin_6 9 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241705g00021 430 ProSiteProfiles Protein kinase domain profile. 9 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241705g00021 430 MobiDBLite consensus disorder prediction 340 390 - -
Stsc241705g00021 430 PANTHER CASEIN KINASE-RELATED 7 374 - -
Stsc241705g00021 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Stsc241705g00021 430 MobiDBLite consensus disorder prediction 405 430 - -
Stsc241705g00021 430 FunFam Casein kinase I isoform delta-like 1 341 - -
Stsc241705g00021 430 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Stsc241705g00021 430 Pfam Protein kinase domain 9 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241705g00021 430 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241705g00021 Stsc-Chr241705 155318 159030 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241705g00021 8 213 MAP Kinase Kinase Kinase AT3G06030 26.606 2.21e-14 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Stsc241705g00021 Pkinase 6.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241705g00021 K08960 - gmx:100792736 691.419