Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc241705g00021 | ATGGAGAGGGTTGTGGGAGGAAAGTACAAGATCGGTAAGAAAATTGGAAGCGGTTCCTTTGGTGAAATTTATATTGCTACAAATATTGAGACCTCTGAGATTGTGGCCGTCAAGATGGAGAACAAGAAGACCAAACATCCACAGCTGCTCTATGAGGCAAAGCTGTATAATCTTCTTCAAGGAGAAAGTGGTGTACCGAGTATGAAATGGTGCGGCATTGATGGCGACAATAATGTTCTGGTTATTGATCTTCTGGGACCGAGTCTTGAGGACCTTTTTGTCTATTGCGGGAGAAAATTTACGTTGAAAACGGTCTTGATGTTGGCTGATCAGATGCTTACGAGAATAGAGTACTTACATTCCAAGGGATATTTGCATAGAGACATTAAACCGGATAACTTCCTTATGGGTCTTGGGAGGAAAGCAACCCAGGTTTATATTATTGACTTTGGACTTGCAAAAAGATATAAGGACCTTAACACAAACAAACATATTCCTTACAGAGAGAATAAAAACTTAACAGGAACTGCACGTTATGCAAGTTGTAATACTCACATCGGAATTGAGCAAAGTCGTCGGGATGATTTGGAATCTCTTGGCTACGTTCTTATGTACTTCTTAAGAGGAAGCCTTCCCTGGCAGGGTCTGAAAGCTGTCACCAAAAAAGAAAAATATGACAGGATTTGTGAGAAGAAGTTGTCAACTCCCATCGAGATGCTTTGCAAGTCATATCCCGTGGAGTTCGCTTCTTACTTTCATTATTGCCACTCCTTGACATTTGATCAACTACCAGATTATGGATTCTTGAAGCGCTTGTTCCGTGATCTGTTCAATCGTGAAGGATATGATTCTGACAATTTGTTCGACTGGACCATTCTAAAGTATCAGCAGACACAACAGAGACAGAGACAGATACAAAATCAATCAGCTGTTTCAGCCGCTGTGCCTAGCAGTCTAGAACCCATGGCTATGGACAAGAGTACAGGAGTCAATGATTCAGCTCATGTAACTTCAACAAGACAGTTAGCGAATCAGAATCATGATCGTCCAAGTGCAACTGCACAGCCTAAACCATCTACTGCTCAAAATCATAGTTCCAAGAACCAGACTGAGAAACATAACGTGAGCAACGGTCCATCTACATCATCTGGCTTGCCAAAATCCTCTAAAGAAAATGTATCAAAAGCAGAAAAACACTTAGGAAGCTCAAACATTGCTCGCGTTTTTGGTAGTAATTCTCGTACTTCAAGCAGTTGGATTCCTTCACTACGCCGGATTTCTTCAGCCAAATAA | 1293 | 0.413 | MERVVGGKYKIGKKIGSGSFGEIYIATNIETSEIVAVKMENKKTKHPQLLYEAKLYNLLQGESGVPSMKWCGIDGDNNVLVIDLLGPSLEDLFVYCGRKFTLKTVLMLADQMLTRIEYLHSKGYLHRDIKPDNFLMGLGRKATQVYIIDFGLAKRYKDLNTNKHIPYRENKNLTGTARYASCNTHIGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAVTKKEKYDRICEKKLSTPIEMLCKSYPVEFASYFHYCHSLTFDQLPDYGFLKRLFRDLFNREGYDSDNLFDWTILKYQQTQQRQRQIQNQSAVSAAVPSSLEPMAMDKSTGVNDSAHVTSTRQLANQNHDRPSATAQPKPSTAQNHSSKNQTEKHNVSNGPSTSSGLPKSSKENVSKAEKHLGSSNIARVFGSNSRTSSSWIPSLRRISSAK | 430 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc241705g00021 | 430 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 347 | - | - | |
Stsc241705g00021 | 430 | MobiDBLite | consensus disorder prediction | 340 | 430 | - | - | |
Stsc241705g00021 | 430 | SMART | serkin_6 | 9 | 291 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc241705g00021 | 430 | ProSiteProfiles | Protein kinase domain profile. | 9 | 367 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc241705g00021 | 430 | MobiDBLite | consensus disorder prediction | 340 | 390 | - | - | |
Stsc241705g00021 | 430 | PANTHER | CASEIN KINASE-RELATED | 7 | 374 | - | - | |
Stsc241705g00021 | 430 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 124 | 136 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc241705g00021 | 430 | MobiDBLite | consensus disorder prediction | 405 | 430 | - | - | |
Stsc241705g00021 | 430 | FunFam | Casein kinase I isoform delta-like | 1 | 341 | - | - | |
Stsc241705g00021 | 430 | ProSitePatterns | Protein kinases ATP-binding region signature. | 15 | 38 | IPR017441 | GO:0005524 | |
Stsc241705g00021 | 430 | Pfam | Protein kinase domain | 9 | 222 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc241705g00021 | 430 | SUPERFAMILY | Protein kinase-like (PK-like) | 5 | 290 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc241705g00021 | Stsc-Chr241705 | 155318 | 159030 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc241705g00021 | 8 | 213 | MAP Kinase Kinase Kinase | AT3G06030 | 26.606 | 2.21e-14 | 73.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CK1_CK1 | Stsc241705g00021 | Pkinase | 6.5e-28 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc241705g00021 | K08960 | - | gmx:100792736 | 691.419 |