Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241705g00019 ATGTGCATTTCCTCTTACAATTACAATCCTATTATCCCTTCTAGAAGACTAGCTCTCTTTCACTTTGCTTCTTCTGTCATTGCAATTCCACACTCCCAATCTGTGTTATCTGGTATAAAAGGATCAGAATTGTTTAGAGTACAAGAGGCTAATGCAGCAGAGAAAAACTTGTTTGAATGGATCAAAAATGACAACAGAAGATTCTTACATGCTGTATACCGTGTTGGGGACTTAGATAAGACTATAAAGTTTTACACTGAGTGCCTTGGCATGAAGCTGTTGAGAAAAAGAGATATACCTGAAGAAAGATACAGTAATGCTTTTCTTGGATATGGCCCTGAAGATTCCAATTTTACAGTTGAGCTTACTTACAATTATGGAGTGGATAAGTATGACATTGGAAATGGGTTTGGTCATTTTGGTGTTGTAGTTGAAGATGCTGCAAAGGCAGTTGATCTAATAAAAGTGAAAGGGGGGAAGGTTACCAAGGAACCAGGGCCTGTCAAAGATGGAAGCACAGTAACTGCTTTCATTCAAGATCCTGATGGTTATGAATTTGAGCTCTTGGAAAGAGGACTTACTTCCGAACCATTATGCCAAGTGTCGCTTTGCGTAGGTGATCTTGACCGCGCCGTAGTCTTCTATCAGAAAGCTATTGGCATGCAAATTCTTCATAGGAAAGACAATCCTGAGCAGAAGAATACAGTTGCTACAATGGGCTATGGTCCTGAAGATAAGAACACAGTTCTAGAACTTACATATAACTATGGTGTCACTAATTATGACAAAGGAAATGGCTATGGACAGATTGCAATAGGCACAAATGATGTGTATAAGAGTGCAGAAGCAATCCAATTGTGTGGAGGCAAGATTATCCGCGAACCCGGGCCGCTGCCAGGTATCAACACCAAGATAGCAGTTTGCTTGGACCCTGATGGTTGGAAATTGGCTTTTGTTGATAATGCTGATTTCCTGAAGGAACTAGAGTAA 990 0.403 MCISSYNYNPIIPSRRLALFHFASSVIAIPHSQSVLSGIKGSELFRVQEANAAEKNLFEWIKNDNRRFLHAVYRVGDLDKTIKFYTECLGMKLLRKRDIPEERYSNAFLGYGPEDSNFTVELTYNYGVDKYDIGNGFGHFGVVVEDAAKAVDLIKVKGGKVTKEPGPVKDGSTVTAFIQDPDGYEFELLERGLTSEPLCQVSLCVGDLDRAVVFYQKAIGMQILHRKDNPEQKNTVATMGYGPEDKNTVLELTYNYGVTNYDKGNGYGQIAIGTNDVYKSAEAIQLCGGKIIREPGPLPGINTKIAVCLDPDGWKLAFVDNADFLKELE 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241705g00019 329 Gene3D - 194 329 IPR029068 -
Stsc241705g00019 329 Gene3D - 42 192 IPR029068 -
Stsc241705g00019 329 FunFam Lactoylglutathione lyase 194 329 - -
Stsc241705g00019 329 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 67 191 IPR037523 -
Stsc241705g00019 329 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 200 318 IPR004360 -
Stsc241705g00019 329 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 69 188 IPR004360 -
Stsc241705g00019 329 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 198 321 IPR029068 -
Stsc241705g00019 329 PANTHER LACTOYLGLUTATHIONE LYASE 51 329 - -
Stsc241705g00019 329 CDD GlxI_Ni 69 189 - -
Stsc241705g00019 329 NCBIfam lactoylglutathione lyase 68 191 IPR004361 GO:0004462|GO:0046872
Stsc241705g00019 329 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 197 321 IPR037523 -
Stsc241705g00019 329 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 66 192 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241705g00019 Stsc-Chr241705 144963 146845 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241705g00019 198 320 Calmodulin-binding Proteins AT1G08110 25.676 3.00e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241705g00019 K01759 - gmx:100810908 530.791