Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241704g00030 ATGGTACAATCATCACAGTATGAAAGATTCTCTAAGGATTTTGTAATGGGAGGGGTAGCAGCAATCATATCGAAGACTGCTGCGGCACCGATTGAGAGAGTGAAACTTTTATTGCAAAACCAAGCTGAAATGATTAAAAGAGGACAACTCAAGAAACCATACTTGGGTGTATGTGATGGATTTAAGAGGGTGTTTGCGGAAGAGGGTGTCATTGCCTTTTGGAGAGGACATCAGGCCAATGTCATTCGATACTTCCCTACACAGGCTTTCAATTTTGCATTCAAAGGTTACTTCAAAAGCATTTTTGGACAATCCAAAGAGAGAGACGGGTACATTAAGTGGTTTGCTGGAAATGTGGCTTCAGGAAGTGCTGCGGGAGCAACTACTTCGCTGCTTCTTTATCATTTAGATTATGCACGAACACGATTGGGCACTGATGCATTGGAGTGCCGTGCTACCGGTCAGCGCCAGTTTAAGGGACTAGTTGATGTATACAGTAAAACCTTGTCAAGTGATGGAGTTGTTGGCTTGTACAGGGGATTTGGGGTGTCAATAGTGGGAATCACCATGTATCGAGGAATGTACTTCGGGCTCTATGACACAATGAAGCCTATCATTTTAGTTGGGCCTTTTGAGGGCAACTTCTTTGCTAGTTTCTTCTTAGGTTGGAGCATTACAACATCCGCAGGGGTTTGTGCATACCCGTTTGATACACTGCGCCGGAGAATGATGCTAACATCTGGACAACCAAACAAGTATTACAACGCAAGGCATGCATTTCGTGAGATTGTTCGTCAAGAGGGTTTTTTAGCTCTATTTCGAGGTGTTACTGCAAATATGCTTCTTGGTGTTGCAGGAGCCGGGGTGCTTGCTGGATATGATCAGCTAAACCGCTTCTCGTCTAGACACTATCGCGACAATGAATCAAACCAGAAAGTTTTGAAATGA 948 0.4388 MVQSSQYERFSKDFVMGGVAAIISKTAAAPIERVKLLLQNQAEMIKRGQLKKPYLGVCDGFKRVFAEEGVIAFWRGHQANVIRYFPTQAFNFAFKGYFKSIFGQSKERDGYIKWFAGNVASGSAAGATTSLLLYHLDYARTRLGTDALECRATGQRQFKGLVDVYSKTLSSDGVVGLYRGFGVSIVGITMYRGMYFGLYDTMKPIILVGPFEGNFFASFFLGWSITTSAGVCAYPFDTLRRRMMLTSGQPNKYYNARHAFREIVRQEGFLALFRGVTANMLLGVAGAGVLAGYDQLNRFSSRHYRDNESNQKVLK 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241704g00030 315 SUPERFAMILY Mitochondrial carrier 8 296 IPR023395 -
Stsc241704g00030 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 205 IPR018108 -
Stsc241704g00030 315 PRINTS Adenine nucleotide translocator signature 54 75 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc241704g00030 315 PRINTS Adenine nucleotide translocator signature 87 99 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc241704g00030 315 PRINTS Adenine nucleotide translocator signature 218 234 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc241704g00030 315 PRINTS Adenine nucleotide translocator signature 10 22 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc241704g00030 315 PRINTS Adenine nucleotide translocator signature 113 126 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc241704g00030 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 299 IPR018108 -
Stsc241704g00030 315 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 6 303 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc241704g00030 315 Pfam Mitochondrial carrier protein 9 104 IPR018108 -
Stsc241704g00030 315 Pfam Mitochondrial carrier protein 114 206 IPR018108 -
Stsc241704g00030 315 Pfam Mitochondrial carrier protein 214 300 IPR018108 -
Stsc241704g00030 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 101 IPR018108 -
Stsc241704g00030 315 Gene3D Mitochondrial carrier domain 11 304 IPR023395 -
Stsc241704g00030 315 FunFam ADP,ATP carrier protein ER-ANT1 11 305 - -
Stsc241704g00030 315 PRINTS Mitochondrial carrier protein signature 178 196 IPR002067 GO:0055085
Stsc241704g00030 315 PRINTS Mitochondrial carrier protein signature 26 40 IPR002067 GO:0055085
Stsc241704g00030 315 PRINTS Mitochondrial carrier protein signature 13 26 IPR002067 GO:0055085
Stsc241704g00030 315 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Stsc241704g00030 315 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Stsc241704g00030 315 PRINTS Mitochondrial carrier protein signature 76 96 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241704g00030 Stsc-Chr241704 163537 165519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241704g00030 1 304 Antiporters AT5G17400 76.316 1.50e-169 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241704g00030 K05863 - gmx:100798418 537.339