Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241703g00047 ATGGCTGCACAAGCTCTCGTATCATCATCATCTCTTGCCTTCTTAGCCGAGGTTTCCAGGCAGAGCCTTGGAGCAAGACCCAATGCTTTCTCCAAAAGGGCCTCCTTCTTAGTCAGGGCCTCTTCCACTCCACCTGTCAAGCAAGGAGCAGACAGACCCTTGTGGTTTGCATCAAAACAGAGTCTCTCTTACTTGGATGGCAGCCTCCCTGGTGACTTTGGATTTGATCCTCTTGGACTTTCAGACCCTGAAGGAACAGGAGGGTTCATTGAGCCAAGATGGCTGGCATATGGAGAGATCATCAATGGTCGTTTCGCAATGTTGGGTGCAGCCGGTGCCATTGCACCCGAGATTCTTGGCAAGGCTGGTTTGATACCTGAGGAAACTGCACTGCCATGGTTCAAGACCGGTGTGATCCCACCTGCAGGAACATACAGCTACTGGGCAGACCCTTACACGCTCTTTGTCTTAGAGATGGCACTCATGGGATTTGCAGAGCACAGAAGGTTCCAAGACTGGGCCAAACCTGGCTCCATGGGAAAGCAATACTTCTTAGGACTCGAGAAGGGTCTTGGAGGTTCCGGTGACCCCGCTTACCCCGGAGGACCTTTCTTCAACCCCCTTGGTTTCGGCAAGGATGAGAAATCCATGAAGGATTTGAAGCTCAAGGAAGTGAAGAATGGGAGGTTGGCCATGTTGGCAATCTTGGGTTACTTTGTTCAAGGCCTTGTGACAGGAGTTGGCCCTTACCAAAACCTCCTTGATCATCTGGCTGATCCCGTTCACAACAACGTACTGACTAGTCTTAAGTTCCACTAA 819 0.5092 MAAQALVSSSSLAFLAEVSRQSLGARPNAFSKRASFLVRASSTPPVKQGADRPLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPEETALPWFKTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPFFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVHNNVLTSLKFH 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241703g00047 272 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 11 267 IPR001344 GO:0009765|GO:0016020
Stsc241703g00047 272 SUPERFAMILY Chlorophyll a-b binding protein 51 268 - -
Stsc241703g00047 272 Gene3D Chlorophyll a/b binding protein domain 54 271 - -
Stsc241703g00047 272 FunFam Chlorophyll a-b binding protein, chloroplastic 53 271 - -
Stsc241703g00047 272 Pfam Chlorophyll A-B binding protein 63 241 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241703g00047 Stsc-Chr241703 157085 158126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241703g00047 1 272 Chloroplast and Mitochondria Gene Families AT1G61520 85.401 9.52e-168 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241703g00047 K08909 - sind:105176865 497.278