Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241703g00004 ATGCCTGCTAGTGCTGGGAACTCAAACGCGTATGATAGAGAAGTGGAACCGTTTGTTGAAGTTGATCCAACTGGCCGGTTCGGCCGTTACGATGATCTGCTTGGTTATGGAGCCGTGAAGAAGGTTTATAGGGCGTTTGATCAAGAAGAAGGCATTGAGGTTGCTTGGAATCAGGTTCGGCTGAGGAATTTCAGTGACGATCCTGTGCTGATAAACAGGCTTCACTCTGAGGTTGAGTTGCTTAGAAACTTGAGCAACAAGTATATCATTGTTTGTTATAGTGTCTGGAAAGACAATGAGCGCCACAACATCAATTTCATCACTGAGGTCTGCACTTCTGGCAATTTGAGGGAATACCGGAAGAAGCACCGCCACGTTTCCATTAAGGCGTTGAAGAAGTGGTCCAAACAAGTCCTTGAAGGGCTGGAGTATCTTCATACTCATGATCCCTGCATTATTCACAGAGATCTCAATTGTAGCAACATCTTTGTCAATGGGAACATTGGACAGGTGAAAATTGGTGATCTAGGATTGGCTGCAATAGTGGGGCGGAGCCATGCAGCGCATTCAATTTTAGGGACCCCAGAGTATATGGCGCCGGAGCTGTATGAGGAGGATTACACTGAGATGGTGGACATATACTCTTTTGGGCTATGTTTGCTTGAGATGGTTACAATGGAGATACCCTACTGCGAATGTGACAGTGTAGCCAAGATATACAAAAAGGTTACAATGGGAATTAAGCCTCAATCCTTGAACAAAGTCACAGACCCAGAGGTGAAGGCATTCATTGAAAAGTGCATAGCACAGCCAAGGGCAAGGCCTTCAGCCACTGATCTCCTTAAGGACCCTTTCTTTTCTGAACTCAACAATGATGAAGAATAA 885 0.452 MPASAGNSNAYDREVEPFVEVDPTGRFGRYDDLLGYGAVKKVYRAFDQEEGIEVAWNQVRLRNFSDDPVLINRLHSEVELLRNLSNKYIIVCYSVWKDNERHNINFITEVCTSGNLREYRKKHRHVSIKALKKWSKQVLEGLEYLHTHDPCIIHRDLNCSNIFVNGNIGQVKIGDLGLAAIVGRSHAAHSILGTPEYMAPELYEEDYTEMVDIYSFGLCLLEMVTMEIPYCECDSVAKIYKKVTMGIKPQSLNKVTDPEVKAFIEKCIAQPRARPSATDLLKDPFFSELNNDEE 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241703g00004 294 CDD STKc_WNK 26 286 - -
Stsc241703g00004 294 FunFam probable serine/threonine-protein kinase WNK9 111 292 - -
Stsc241703g00004 294 ProSiteProfiles Protein kinase domain profile. 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241703g00004 294 Gene3D Phosphorylase Kinase; domain 1 12 109 - -
Stsc241703g00004 294 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 289 - -
Stsc241703g00004 294 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241703g00004 294 SUPERFAMILY Protein kinase-like (PK-like) 21 286 IPR011009 -
Stsc241703g00004 294 Gene3D Transferase(Phosphotransferase) domain 1 111 291 - -
Stsc241703g00004 294 FunFam Probable serine/threonine-protein kinase WNK1 13 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241703g00004 Stsc-Chr241703 10324 12185 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241703g00004 3 286 MAP Kinase Kinase Kinase AT5G55560 76.761 1.73e-171 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Stsc241703g00004 Pkinase 8.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241703g00004 K08867 - gmx:100798280 553.132