Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241700g00015 ATGGAGAAAACCTTGGGATTAGGGTTCTTATTCTTCTCATTCACAGTCCTCTTCAGCGTGTTCTCCTTCCTTTTGTTCCTCTTGAGGATGAAGCCATGGTGCAACTGTCACACCTGCAGGACCTACACCACAATGAGCTGGACCACCCAATTCGCAAACCTCTCCGATTGGTACACTCATCTCCTCCGTGAATCCGCCACCGGAACCATCCACATCCACGTCTTGGGCAATATTGTAACGTCAAACCCCGGCAACGTGGAGCACATGCTCAAGACGCGCTTCCAAAATTACCCGAAAGGGAGGCCGTTCTCAGCCATACTCGGCGATCTCTTGGGCCGCGGGATCTTCAATGTTGACGGGAGCAAGTGGATGTTTCAGAGGAAGATGGCAAGCCTTGAGCTCGGGAGCGTGGCGGTTCGGACCTACGCGCTGGAGATAGTGACGGAGGAGATACGGACGAGGCTGCTTCCTCTTCTCATGGCTTCTTCGGTTGCATGTGCTCAAAACCACCAGGATAGTGTGATAGACTTACAAGACATCTTGCGACGGTTCTCGTTCGACAACATTTGCAAATTCTCCTTCGGCTTGGACCCACGCTGTCTCCTACCATCCCTACCGGTTTCACCCTTCGCCGTCGCTTTTGACACCGCCTCCAAGCTCTCCGCGGAGCGTGCAATGACAGCATCGCCCATCATATGGAAGATCAAGCGCCTACTTAACATTGGCTCCGAGAAGAAGCTGAACCATGCCATCAACACCATTAACAACTTAGCCGAAGATCTTATAAACAAGCGCAGGGAAATGGGATTCTCCACTAGAAACGATCTTCTCTCAAGGTTCATGACCTCTGTCGGAGACGACAACAAGTACCTCAGAGACATAGTCGTTAGTTTCCTACTCGCCGGCCGCGACACCGTTGCCGCGGCCTTAACCGGTTTCTTTTTCTTGTTATCCAAGTATCCAAGAGTTGAGGTGTTGATCCGGGAAGAATTGAACCGGGTTATGGATGACCCGGTCCAGGAATGTGCAAATTTCGAGCAACTGCGGCAAATGCATTATCTGAATGCTGCGGTTCATGAGAGCATGAGACTGTTTCCGCCGGTTCAGTTTGACTCGAAATTCGCACAAGAGGATGATGTGTTACCGGATGGTACATTTGTACCCAAGGGTACAAGGGTTACATACCATCCGTATGCAATGGGTCGGATGGATCGGGTTTGGGGATCCGATTGTCTCGAATTCAAACCCGAGAGATGGTTGAAGGATGGTGTGTTTGTGCCGGAGGATCCATTCAAATACCCGGTTTTTCAAGCCGGGGTTAGGATTTGTTTGGGAAAAGAGTTGGCACTAGTAGAGATGAAATCCGTGGTGGCTGCATTGGTTAGGCAATTTGATATTCGGGTGGTTGGGTCTGGTTTGGAGCCCCGGTTTGTAGCGGGTCTCACGGCGACGCTAAGGGGCGGGTTATCCGTTCAGATTTATGAGAGAAGTCGTGGGTGA 1500 0.5107 MEKTLGLGFLFFSFTVLFSVFSFLLFLLRMKPWCNCHTCRTYTTMSWTTQFANLSDWYTHLLRESATGTIHIHVLGNIVTSNPGNVEHMLKTRFQNYPKGRPFSAILGDLLGRGIFNVDGSKWMFQRKMASLELGSVAVRTYALEIVTEEIRTRLLPLLMASSVACAQNHQDSVIDLQDILRRFSFDNICKFSFGLDPRCLLPSLPVSPFAVAFDTASKLSAERAMTASPIIWKIKRLLNIGSEKKLNHAINTINNLAEDLINKRREMGFSTRNDLLSRFMTSVGDDNKYLRDIVVSFLLAGRDTVAAALTGFFFLLSKYPRVEVLIREELNRVMDDPVQECANFEQLRQMHYLNAAVHESMRLFPPVQFDSKFAQEDDVLPDGTFVPKGTRVTYHPYAMGRMDRVWGSDCLEFKPERWLKDGVFVPEDPFKYPVFQAGVRICLGKELALVEMKSVVAALVRQFDIRVVGSGLEPRFVAGLTATLRGGLSVQIYERSRG 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241700g00015 499 Pfam Cytochrome P450 78 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241700g00015 499 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241700g00015 499 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241700g00015 499 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241700g00015 499 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241700g00015 499 CDD CYP86A 72 489 - -
Stsc241700g00015 499 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241700g00015 499 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241700g00015 499 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241700g00015 499 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241700g00015 499 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241700g00015 499 Gene3D Cytochrome P450 35 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241700g00015 499 PANTHER CYTOCHROME P450 28 489 - -
Stsc241700g00015 499 SUPERFAMILY Cytochrome P450 53 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241700g00015 499 Coils Coil 247 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241700g00015 Stsc-Chr241700 56892 59362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241700g00015 24 497 Cytochrome P450 AT2G27690 62.839 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241700g00015 K20624 - gmx:100813091 728.013