Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241700g00012 ATGGACAAACCGCCACCGCCACCAGCGCCATCGCCGTGGCAGGATGATCTTGCCGACGACCTCCAGTCATTGAGCTTCGCCTCCACCGCCACCACCACAACCACCGCCGACATCAAGCGCAGTACAAGCTTCGGCTCCGAAACCACCACACTGACCGCCTCCACCTCCGCCCGCATCCCTCTGCCTCCGACGAAGCCACACGCACCTTCCTCGGACCCCCGCTGGTCCGCAATCCACCGGATCCGATCATCCTCCGACGACTCCGCCTCCTCCGGCCGCATCCTCCTGCCATCAGACCTAGTGTTCTCCCGGCGCCTGGGCTCCGGCGACATCAGCTCGGTGTACCTGGCAGAGCTGAAAGCCTCTTCCAACGTAACGTTCGCAGCGAAGGTGATGGACAAGAAGGAGCTAGCGAGCAGGAGCAAGGAAGGGAGAGCGAGGACAGAAAGGGAAATTCTGGAGTTGTTGGATCATCCTTTCTTGCCGACGTTGTACGGTGCCATCGAGGCACCGAAATGGCTGTGCCTCCTGACAGAGTTCTGCCCCGGCGGCGACCTCCACGTGCTCCGGCAGCGCCAGGCAAACAAACGCTTCAACGAAAGCGCCGTCAGGTTCTACGCCTCAGAGGTGTTGGTGGCACTTGAATACCTTCACATGCTAGGGATAGTTTACCGTGATCTCAAGCCCGAGAATGTGTTGGTTCGATCTGACGGCCACATCATGCTCACCGACTTTGACCTCTCCTTAAAATGTGATGAATCTACACCAACGGCTCAGATCATCTCTGATCAAAAGAATTCTCCACATTTAGTCCTACAAAAGGATCTTCACACTGAATCCTCTCAATTCACATCGTCCTCATGCATACTACCAAACTGTATAGTCCCCGCAGTGTCATGTTTCCACCCAAAGCGCAGGCGAAAGAAGAAGAAGCAAGGCCATCGTGGTGGGCCCGAGTTCGTGGCTGAGCCCATGGATGTCCGGTCCATGTCATTTGTTGGGACTCACGAGTACCTGGCCCCGGAGATTGTGTCTGGTGAAGGACACGGTAGTGCCGTGGACTGGTGGACCTTAGGGATATTTATATTTGAATTGTTTTATGGTGTCACACCCTTTAGAGGCATGGACAATGAGCTAACCCTAGCAAACATAGTGGCTCGAGCATTGGAGTTCCCAAAGGAACCCATCGTGCCAGCCACGGCAAAGGACCTTATCTCACAGTTATTGGTTAAGGACCCTGCTAGGAGGCTTGGTTCAATAATGGGGGCTTCCCCTATCAAGAACCATCCATTTTTTCAAGGTGTGAATTGGGCATTGCTAAGGTGCACAACACCACCCTATGTGCCCCCACCTTATACTAAAGAAGTTGTATCTGATGAGAGCTGTCCCCACACTCCCATTGATTATTATTAA 1413 0.5414 MDKPPPPPAPSPWQDDLADDLQSLSFASTATTTTTADIKRSTSFGSETTTLTASTSARIPLPPTKPHAPSSDPRWSAIHRIRSSSDDSASSGRILLPSDLVFSRRLGSGDISSVYLAELKASSNVTFAAKVMDKKELASRSKEGRARTEREILELLDHPFLPTLYGAIEAPKWLCLLTEFCPGGDLHVLRQRQANKRFNESAVRFYASEVLVALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDESTPTAQIISDQKNSPHLVLQKDLHTESSQFTSSSCILPNCIVPAVSCFHPKRRRKKKKQGHRGGPEFVAEPMDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIFELFYGVTPFRGMDNELTLANIVARALEFPKEPIVPATAKDLISQLLVKDPARRLGSIMGASPIKNHPFFQGVNWALLRCTTPPYVPPPYTKEVVSDESCPHTPIDYY 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241700g00012 470 FunFam serine/threonine-protein kinase D6PK-like 327 450 - -
Stsc241700g00012 470 MobiDBLite consensus disorder prediction 41 59 - -
Stsc241700g00012 470 MobiDBLite consensus disorder prediction 41 74 - -
Stsc241700g00012 470 SUPERFAMILY Protein kinase-like (PK-like) 90 459 IPR011009 -
Stsc241700g00012 470 PANTHER FLIPPASE KINASE 1-RELATED 39 453 - -
Stsc241700g00012 470 ProSiteProfiles Protein kinase domain profile. 100 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241700g00012 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Stsc241700g00012 470 Gene3D Phosphorylase Kinase; domain 1 100 184 - -
Stsc241700g00012 470 Gene3D Transferase(Phosphotransferase) domain 1 326 450 - -
Stsc241700g00012 470 FunFam serine/threonine-protein kinase D6PKL2 99 184 - -
Stsc241700g00012 470 FunFam serine/threonine-protein kinase D6PK-like 185 252 - -
Stsc241700g00012 470 SMART serkin_6 100 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241700g00012 470 Gene3D Transferase(Phosphotransferase) domain 1 185 289 - -
Stsc241700g00012 470 Pfam Protein kinase domain 103 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241700g00012 470 Pfam Protein kinase domain 329 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241700g00012 Stsc-Chr241700 42906 49303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241700g00012 12 470 AGC Kinase Gene Family AT3G44610 67.304 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Stsc241700g00012 Pkinase 2.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241700g00012 K08286 - gmx:100792738 683.33