Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241699g00029 ATGTGCAGCAGCGTAGTGAGGGCAATGGAGAACAACAATTACAACCACCAGGGTGATTTAACTGATATACTCCGTGGAGGACCATACGGCGGTGCTACCACCGCTTCCGATGAACCACCGTCGTCATATCACTGGCAACAGCAACAGCAACTCGACAACGACGCCGCCAGCAGCTGCTACTTTGGGGATCCATTCTCAACCATGAGAGATCCTTTCCTTCACGAGCTTCACATCCCTCCTTCCTCCTCTTACTTCGAAGAACCACCACTTCCACCGCCGCCGCCGCCGCCTGCCTTGGCTACTCCTCCTGTTTATAACAGTTACGGTGGTGCACACCTTCATCAACATGAGATGAGATCTTCATCTTGTTCTGCTTCTTCTTCGATTACCTGCAACAACATATTCTCGAACATGATTCAGATATCTCCGAGCGCTAACAACACTTCTTCTTCCTCTTTGTCTCCAAGACCAGCAGCAATCAAAGCTTCTTCGTCATCGTCTTCTTCTTCTTCTTCTATGCTCTCAAACGCCGCCATGGTCAATGCAACATCAATCCCTTCCAACAAGCAAGATTGCCATCTTCTCGACAACGCTGCTGCACTCCAGATCTCATCTCCTCGCAATCCCGCTCTTAAGCGCAGGAAGAATCAGGCGAAAAAGGTAGTGTGTATTCCTGCACCAGCAGCTGCAAACAGCAGACAAACTGGGGAGGTTGTTCCTTCCGATTTGTGGGCATGGAGAAAATACGGTCAGAAACCCATCAAAGGTTCACCTTATCCAAGGGGTTACTATAGATGCAGCAGCTCAAAGGGTTGTTCAGCAAGGAAACAAGTGGAGAGGAGCAGAACAGATCCAAACATGCTTGTTATTACTTACACTTCTGAGCACAATCATCCATGGCCTACTCAGAGAAATGCTCTTGCTGGTTCAACAAGGTCTCAGCCATCCAAGAACACCACCAATGCTACTAATACTAATGCTTCTTCAAAGAATTCAGAAACCTCAAAGGTTAAGCTAAAGGAGGAGAATAGTAATAATCAGCAGCAAGAGATGAGCAGTGAAGGAGGAGGGAGTGCTTCAGTGAAGGAAGAGATAGATCATCATCATCATAGTAGTAATCATGAACTTGAGCTTGAACTTGAGTTGGATAATGATGAAGAATTCAGTGATGGACTTTCATACAAGCCATCAATGATTGAAGAGGGTGGTAATAATAATAGTAATAACAACAATCAATCCTCTGAGGATTTCTTTGCAGATTTGGGGGAAATTGAAGCTGATCCATTGAACCTGTTGTTCAGCACTCATCAAGGTTACAATGCAGGTGGTGGTGGTGGTGATCATGATCAAAGGGAATCCAAGGCCTTAGATCCATTCAATCTCTTTGATTGGTCTTCATCAGGAGGAGACACCAATAGCAACAACAATTCATCATTTGAAGAACCTAATAATAAGGGAAGGTTATAA 1467 0.4526 MCSSVVRAMENNNYNHQGDLTDILRGGPYGGATTASDEPPSSYHWQQQQQLDNDAASSCYFGDPFSTMRDPFLHELHIPPSSSYFEEPPLPPPPPPPALATPPVYNSYGGAHLHQHEMRSSSCSASSSITCNNIFSNMIQISPSANNTSSSSLSPRPAAIKASSSSSSSSSSMLSNAAMVNATSIPSNKQDCHLLDNAAALQISSPRNPALKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNTTNATNTNASSKNSETSKVKLKEENSNNQQQEMSSEGGGSASVKEEIDHHHHSSNHELELELELDNDEEFSDGLSYKPSMIEEGGNNNSNNNNQSSEDFFADLGEIEADPLNLLFSTHQGYNAGGGGGDHDQRESKALDPFNLFDWSSSGGDTNSNNNSSFEEPNNKGRL 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241699g00029 488 MobiDBLite consensus disorder prediction 464 488 - -
Stsc241699g00029 488 MobiDBLite consensus disorder prediction 360 377 - -
Stsc241699g00029 488 SMART WRKY_cls 240 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc241699g00029 488 MobiDBLite consensus disorder prediction 84 102 - -
Stsc241699g00029 488 Pfam WRKY DNA -binding domain 242 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc241699g00029 488 MobiDBLite consensus disorder prediction 341 356 - -
Stsc241699g00029 488 SUPERFAMILY WRKY DNA-binding domain 238 301 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc241699g00029 488 MobiDBLite consensus disorder prediction 440 488 - -
Stsc241699g00029 488 MobiDBLite consensus disorder prediction 79 103 - -
Stsc241699g00029 488 ProSiteProfiles WRKY domain profile. 235 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc241699g00029 488 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 111 431 IPR044810 GO:0003700
Stsc241699g00029 488 MobiDBLite consensus disorder prediction 292 377 - -
Stsc241699g00029 488 MobiDBLite consensus disorder prediction 145 172 - -
Stsc241699g00029 488 MobiDBLite consensus disorder prediction 292 333 - -
Stsc241699g00029 488 FunFam probable WRKY transcription factor 14 214 294 - -
Stsc241699g00029 488 Gene3D WRKY domain 214 294 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241699g00029 Stsc-Chr241699 159083 163068 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241699g00029 1 475 WRKY Transcription Factor Family AT1G30650 40.246 8.97e-85 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc241699g00029 WRKY 2.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241699g00029 - - aprc:113852911 404.445