Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241699g00010 ATGGACGTTAGCGAATCCGGCAATTGCTATGCAGAAGATTCGTTCGAAATAGAATGCAGGCAGGGTGATACACCATACCTGAAATCTATAGGGATGGAGATCTCATCAATTGATGTATCAGAAGGCACCATTGAAATTATGCATCCAATTCACAGTTGGAACTGTAAACCCAAACACCACCAGAACGCTTCTGATCTGAGAGAAAGTTCCTTCGTGTATTCGCAGGAAAGCAACATTTTTGTGTCAGTTGGATGCAATGAAATCTCGTTCTTGCTCTCCAACGAAACGCAGGTTAGCGGCTGCGTTTCCATTTGCAACGGCAACAAGAAGAAGGAGGACATCGATGAGATCACCAATTGCAACGGAATTTACTGCTGCGTGACGTCATTGCCTTTATATCTCTCGGAATTTAGCGTTGAAACGGAGAGTTTCGGGATTAACCAGGCGAGTGGGAGTGATGATGATCAGTGCAGCTATGCGTTGATTATGAAAAGAATCTATCCTGACGAATACAGCAATGGAAATGATCAGTATAAATATTGGCGTGTTCCAGATGTGGTGCAAGCGAAGAGCGTTCCGGTGGTGTTGGAATGGGAGATTCGTAACTCATCCGTAAGGCTTCCTAGCGACTACTGCAAGAACAGCAGTGTTACATCATCTTCCAAGAACTCAGGTCGGAGATGTTACTGCGACAGCTATTCCTCTGGCAATCCCTACCTTGAAGAAGGCTGCACGGTTATCGGCGACGATTACATGCTTGTCGGCAAAGTGAAAAGGAACCGATCAAGATGGGCTATAATAGGTGTTTCCTCGAGTCTTGGATCCATCATTTTACTTCTTGGTTCATGGCGAGTTTATAAAGTTGTAAGGAGAAGAAGAGTGAAAAACCGCATGGAAAAAAACTTCAAAAAGAATGGAGGTTTGCTGCTAGAAAAAAGGCTATCTTCAGGTGAAGTTAATGTTGACAAAGTCAAACACTTCAGCTTAAAGGAGTTAGAAAAGGCCACAGATAACTTCAACTTGAACAGAGTCCTAGGTAAGGGAGGACAAGGTACCGTCTATAAGGGTATGCTTGTAGATGGAAAGATTGTTGCTGTCAAAAAGTTCAGCGTCCAAGGGAATGTTGAAGAGTTCATCAATGAATTCGTCATACTTTCACAAATTAACCATAGAAACGTGGTTAAGTTGTTAGGATGTTGTTTGGAGAAAGAAATTCCCTTGCTTGTTTATGAGTTCATCCCTAATGGAAATCTTTATGAATATTTGCATGACCAAAATGAGGACTTGCCAATGACATGGGATATGCGTTTGAGAATTGCAACTGAGATTGCAGGAGCACTTTTTTACTTACACTCTGCTGCTTCTCAACCAATTTATCACAGAGACGTGAAGTCAACAAATATACTATTGGATGGAAAGTACAGAGCAAAAGTAGCTGACTTTGGAGCTTCTAGAATGATCTCTATTGAAGACACTCATCTCACCACAGTTGTTCAAGGAACTTTCGGATATTTGGATCCTGAATACTTTCACACTAGTCAGTTGACAGAAAAGAGTGATGTTTACAGTTTTGGAGTTGTTCTTCTTGAACTATTGACAGGACAAAAGCCATTATCCTCCTTAAGACCCAACGAAGCCAAAAGTTTGGCTTCCTATTTTGTTCTGTGCGTGGAGGAAGATCGTTTGTTTGACATAATCGACGATAGGGTGACAAAAGAAGGAGAGAAAGAACACATCATTGCTGTTGCGAATCTTGCATATAGATGCTTAGAGCTCAATGGGAAAAGAAGGCCAACTATGAAAGAAGTCGCTAGAGAATTAGATGAGATCTGGAAATTGGAGAGGAAGTCTAATAATGCACAACAAAATCATCCCGAAGAAATTGAGCAACCTGCAATTGAATATCAGCATCCATGGGTTGCAGATTCTGCTTCTGAGATAAGTCCAAGCTACATAGCATTCACCTCAGAGTCAGATGTTATGCATATTCTTACCGAATAG 2001 0.4148 MDVSESGNCYAEDSFEIECRQGDTPYLKSIGMEISSIDVSEGTIEIMHPIHSWNCKPKHHQNASDLRESSFVYSQESNIFVSVGCNEISFLLSNETQVSGCVSICNGNKKKEDIDEITNCNGIYCCVTSLPLYLSEFSVETESFGINQASGSDDDQCSYALIMKRIYPDEYSNGNDQYKYWRVPDVVQAKSVPVVLEWEIRNSSVRLPSDYCKNSSVTSSSKNSGRRCYCDSYSSGNPYLEEGCTVIGDDYMLVGKVKRNRSRWAIIGVSSSLGSIILLLGSWRVYKVVRRRRVKNRMEKNFKKNGGLLLEKRLSSGEVNVDKVKHFSLKELEKATDNFNLNRVLGKGGQGTVYKGMLVDGKIVAVKKFSVQGNVEEFINEFVILSQINHRNVVKLLGCCLEKEIPLLVYEFIPNGNLYEYLHDQNEDLPMTWDMRLRIATEIAGALFYLHSAASQPIYHRDVKSTNILLDGKYRAKVADFGASRMISIEDTHLTTVVQGTFGYLDPEYFHTSQLTEKSDVYSFGVVLLELLTGQKPLSSLRPNEAKSLASYFVLCVEEDRLFDIIDDRVTKEGEKEHIIAVANLAYRCLELNGKRRPTMKEVARELDEIWKLERKSNNAQQNHPEEIEQPAIEYQHPWVADSASEISPSYIAFTSESDVMHILTE 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241699g00010 666 FunFam Wall-associated receptor kinase 2 413 630 - -
Stsc241699g00010 666 Coils Coil 603 623 - -
Stsc241699g00010 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Stsc241699g00010 666 Gene3D Phosphorylase Kinase; domain 1 311 412 - -
Stsc241699g00010 666 SMART serkin_6 339 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241699g00010 666 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 65 618 IPR045274 GO:0007166
Stsc241699g00010 666 Gene3D Transferase(Phosphotransferase) domain 1 413 635 - -
Stsc241699g00010 666 CDD STKc_IRAK 345 610 - -
Stsc241699g00010 666 SUPERFAMILY Protein kinase-like (PK-like) 320 607 IPR011009 -
Stsc241699g00010 666 FunFam Wall-associated receptor kinase 2 309 412 - -
Stsc241699g00010 666 Pfam Protein tyrosine and serine/threonine kinase 340 607 IPR001245 GO:0004672|GO:0006468
Stsc241699g00010 666 ProSiteProfiles Protein kinase domain profile. 339 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241699g00010 Stsc-Chr241699 48893 53767 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241699g00010 9 665 Receptor kinase-like Gene Family AT1G79680 41.393 2.19e-164 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Stsc241699g00010 PK_Tyr_Ser-Thr 4.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241699g00010 - - gmx:100798794 760.755