Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241699g00007 ATGAATGATCCAAAATGCTATGCCGACAAGTCCTTCGAAATCGAATGCAGAAACCAGCAGAAGCCTTACCTTAAGCACCTAAACCTTGAAGTCACAAACATAGATACTTCAGATAGCATGGTTGAGATCATGAACCCGGTTTTCCGATTGAACTGCAAAGATGAGAAAGATTCAAAACCTTTCATAAATCTCAGTGGAACACCTTTCTCTTATTCCAACGTTAGAAACAAGTTCACGGCCATAGGTTGCAACAAAATCGCATTCTTGGTGTCTAATGGGTTAGAAGTGAGTGGGTGTGTGACACTTTGCGATGAACACGACAATAAAGAGGTTAACAGCAACGTTGCTTATGGTTACGGACAAGGAAGCGATGGGTGCTTAGGCAGGTTCTGCTGTGAGACATCACTGCCTCTGTACCTTTCAGAATTCAACGTGACACTTGAAAGCATGAAGGATAGAAATTCAAGCGATGAATGCGTTCATGCCTTGATTGGGACAGAGTATTGGTACGAAATTTATGATGGTGTTAATGGTGGTATTGAGTATAGAAGCCTTGGTGACTTGAAGGGTTTGAACTATGTTCGAGCCATGCTTGATTTTGTGATTCTCAACAACACTGTGAAACTACCTTCGGATTCGAACTGCACCCATGTTGTTGGTTATTCTTCTTCTTCTTCTGCTAGAAGGTGTGAGTGCTACTCAGAGTTTTATGGCAATCCATATGTTACTGGAGGTTGCATTGATTTTGACTCATCCAATAAGAACAGCCGAGCAAAGTGGGTTATAATAGGAGTATCTGCAAGCCTGGGATCCATCATTCTCCTTCTTGGTCTGTTGTTTTTGTACATTGTTGTAAGGAGAAGAATTATAAAGAAACGCAAACAGAAATTTTTCAAACAAAATGGTGGATTGCTATTGCAGCAAAGATTATCCTCTGGAGAAGTGACTGTTGAACAAGCTAAAGTGTTTAGCTTAAGGGAGTTAGAGAAGGCCACTGACAACTTCAATGTGAACAGAGTTCTTGGAAAGGGAGGTCAAGGTACTGTCTACAAGGGCATGCTGGTAAATGGTGAAATTGTTGCTGTCAAGAAGTTTAAGGTCCAAGGAAAGGTTGAAGAATTCATCAACGAATTCGTCATCCTTTCTCAGATTAACCATAGAAATGTGGTGAAACTCTTAGGGTGCTGTTTGGAGACAGAGATTCCTCTGCTTGTTTATGAATTCATTCCTAATGGTAATCTTTATGAATATTTGCATGATCAAAACGAAGAGTTACCAATGACTTGGGACATGCGTTTAAGGATTTCGATCGAAGTTGCAGGGGCTTTGTTTTACTTACATTCAATTGCATATCAGCCAATTTATCATAGAGATGTGAAATCAACAAATATACTTTTAGATGGAAAGTATAGAGCAAAATTAGCAGACTTTGGTGCATCTAGATTGATTTCTACTGAAGCAACTCATCTCACTACAGTAGTTCAAGGTACTTTTGGATATTTAGATCCTGAATATTTTCATACTAGTCAGTTTACAGAAAAGAGTGATGTTTATAGCTTCGGAGTTGTTCTTGTTGAGCTTTTGACGGGTGAGAAACCGATATCATCCATGAGAGAGGAGGAGGATGCCAAGAGTTTGGCATCTTATTTTGTTGTTACTATGGAACGAGATTGTTTGTTTGAGATTGTTGACAAGAGAGTCATGAAAGAAGGGGAGCAAGAACAGATCATTGGGGTTGCTAATCTTGCATATAGATGCTTGGAGTTGAATGGGAGAAAAAGGCCTACTATGAAAGAAGTCATATTCGAGTTAGAAAGGATTCGGAATTTGGATAGAAAGGTTGGCGGCGGCGGCGGCGGCGGCGGCGGCGATGTTGATTTACAAGGACAAAGCCGCCATGAAGAGATTGAGTTTGTTGGAACTGAAATGCCGTGGACAGGAGATTCAGAATTGGATACATTGGCAAGCATAGTGAACAATACAAGCTCCTCGGAAATTAGGCCTATTCATGCAAAATATAATTGA 2025 0.403 MNDPKCYADKSFEIECRNQQKPYLKHLNLEVTNIDTSDSMVEIMNPVFRLNCKDEKDSKPFINLSGTPFSYSNVRNKFTAIGCNKIAFLVSNGLEVSGCVTLCDEHDNKEVNSNVAYGYGQGSDGCLGRFCCETSLPLYLSEFNVTLESMKDRNSSDECVHALIGTEYWYEIYDGVNGGIEYRSLGDLKGLNYVRAMLDFVILNNTVKLPSDSNCTHVVGYSSSSSARRCECYSEFYGNPYVTGGCIDFDSSNKNSRAKWVIIGVSASLGSIILLLGLLFLYIVVRRRIIKKRKQKFFKQNGGLLLQQRLSSGEVTVEQAKVFSLRELEKATDNFNVNRVLGKGGQGTVYKGMLVNGEIVAVKKFKVQGKVEEFINEFVILSQINHRNVVKLLGCCLETEIPLLVYEFIPNGNLYEYLHDQNEELPMTWDMRLRISIEVAGALFYLHSIAYQPIYHRDVKSTNILLDGKYRAKLADFGASRLISTEATHLTTVVQGTFGYLDPEYFHTSQFTEKSDVYSFGVVLVELLTGEKPISSMREEEDAKSLASYFVVTMERDCLFEIVDKRVMKEGEQEQIIGVANLAYRCLELNGRKRPTMKEVIFELERIRNLDRKVGGGGGGGGGDVDLQGQSRHEEIEFVGTEMPWTGDSELDTLASIVNNTSSSEIRPIHAKYN 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241699g00007 674 FunFam Wall-associated receptor kinase 2 409 616 - -
Stsc241699g00007 674 CDD STKc_IRAK 341 607 - -
Stsc241699g00007 674 Gene3D Transferase(Phosphotransferase) domain 1 409 614 - -
Stsc241699g00007 674 SUPERFAMILY Protein kinase-like (PK-like) 320 602 IPR011009 -
Stsc241699g00007 674 Pfam Protein tyrosine and serine/threonine kinase 337 602 IPR001245 GO:0004672|GO:0006468
Stsc241699g00007 674 FunFam Wall-associated receptor kinase 2 305 408 - -
Stsc241699g00007 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Stsc241699g00007 674 Gene3D Phosphorylase Kinase; domain 1 307 408 - -
Stsc241699g00007 674 ProSiteProfiles Protein kinase domain profile. 335 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241699g00007 674 SMART serkin_6 335 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241699g00007 674 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 62 612 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241699g00007 Stsc-Chr241699 32985 36093 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241699g00007 6 609 Receptor kinase-like Gene Family AT1G16120 42.401 7.82e-164 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Stsc241699g00007 PK_Tyr_Ser-Thr 9.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241699g00007 - - gmx:100798794 730.709