Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241698g00016 ATGGGGGACCAAAATGGTATAGGGAAGGTGCTGAAAAAGGTGAAGCCATATCTTGCTATGGTTTCTCTTCAGTTTGGGTACTCTGGAATGTATGTGATCACCATGGTTTCTTTCAAACATGGAATGAGTCATTGGGTACTCTCTGTATACCGTCATGTTATTGCCACACTCATCATGGCTCCCTTTGCTTTTGTTCTTGAAAGAAAAACAAGGCCAAAGATGACTCTGCCGATCTTCCTGAGGTTAGCGGCGCTCGGTTTCCTCGAGCCAGTTCTTGACCAAAATTTGTACAACATGGGCATGAAGAGCACCTCAACAACGTTTGCATCGGCCATTGTTAATGTCCTCCCAGCCATTACTTTTGTTATGGCTCTCATTTTCAGGTTAGAGACAGTGAATTTGAGAAAGATTCACAGCATAGCGAAGGTAATTGGAACAATAGTGACAGTATCAGGAGCCATGGTTATGACTCTGTACAAAGGTCCAGCACTTGAGATAATAAAGGGACATGGAGGAGGAGCCACAAACCATGGTAGTAGTAATAGCTCAGGAACAGAGCCTTCTGAACAAAACTGGGTGGTTGGGACACTCATGCTCATTGCAAGTTGCGGTGGTTGGGCTAGCTTCTTTATCTTGCAATCTTTGACTTTAAAGATATACCCAGCAGAGCTCTCACTCACCTCTTGGATATGCTTTTTGGGCATTTTTGAGGGTGCAATTGCGACCCTTATATTTGAACGTGACATGAGTGTTTGGTCCATTGGCTGGGACTCAAGGCTTCTTGCTTGTGTTTATTCTGGGGTGGTGTGCTCTGGAATTGCATATTATGTACAAGGAGTTGTGACCAGGGAACGTGGACCAGTTTTTGTGACTTCTTTCAGCCCTCTAATTATGATTATCACTGCTGCATTAGGTACAATTGTCTTGGCTGAGCAAATTCATCTTGGAAGTGTAATTGGAGCTATTGTAATTGTTTGCGGGCTTTACACTGTGGTATGGGGAAAAAGCAAAGACACTGTGAAGAATACAGAAGAAGCAGTGAAAGTTGAGGAGGGTCAAGAATTGCCAATAAGGGACACCAGAAAATCAGGATCTGAAATTTTAATTTAA 1110 0.4315 MGDQNGIGKVLKKVKPYLAMVSLQFGYSGMYVITMVSFKHGMSHWVLSVYRHVIATLIMAPFAFVLERKTRPKMTLPIFLRLAALGFLEPVLDQNLYNMGMKSTSTTFASAIVNVLPAITFVMALIFRLETVNLRKIHSIAKVIGTIVTVSGAMVMTLYKGPALEIIKGHGGGATNHGSSNSSGTEPSEQNWVVGTLMLIASCGGWASFFILQSLTLKIYPAELSLTSWICFLGIFEGAIATLIFERDMSVWSIGWDSRLLACVYSGVVCSGIAYYVQGVVTRERGPVFVTSFSPLIMIITAALGTIVLAEQIHLGSVIGAIVIVCGLYTVVWGKSKDTVKNTEEAVKVEEGQELPIRDTRKSGSEILI 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241698g00016 369 Pfam EamA-like transporter family 195 332 IPR000620 GO:0016020
Stsc241698g00016 369 Pfam EamA-like transporter family 28 150 IPR000620 GO:0016020
Stsc241698g00016 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 150 - -
Stsc241698g00016 369 PANTHER WAT1-RELATED PROTEIN 15 339 IPR030184 GO:0016020|GO:0022857
Stsc241698g00016 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241698g00016 Stsc-Chr241698 155839 162825 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241698g00016 8 360 Nodulin-like Gene Family AT4G08300 64.407 3.25e-168 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241698g00016 - - gmx:100814921 598.971