Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241698g00008 ATGGGTGAAGAATTGAGCTATTGTGAGAATGTTCGTGCATGGTTCTCAAAATCAAAGGCATTTTTGCTGATACTAAGCTTGCAATTTGGGTCTGCGGGCATGTACATTATAACCATGGATGCTCTAAACAAGGGAATGAGTCATTATGTCTTTGTTGTTTATCGTAACGTCGTTGCCACCGTCGCTCTTGGCCCCTTCGCTTTTTTCCTTGAAAGGAAAGTTAGGCCCAAGATGACACCTCGGATTTTTGCAGAGATTTTGGCACTGGCTTTTATAGAGATCATACTTGATCAATGCTTCACCTTCTTGGGAATGAAATTAACTTCAGCATCTTTTGCATCTGCTGTGATGAATTCCGTTCCCTCCATAACCTTTGTGCTAGCAATCATTTTTAGATTGGAACGCATGAAGATTAGGAACATAGGATGCCAAGCGAAAGTGATTGGCACTGCGGTAAGTCTTGGAGGCGCTATTCTAATGGCAATGTACAAAGGTCCTATTCTTAACATTGTGAAGTCATCAACTACCCATGTGGCACACACTGGCAATAATGCTAACACCACTTCTGACCACTGGCTCATGGGTGCAATCTTCATCCTCATTGGCTGCGCTGGCTTCTCTGGTTTCTACATTTTGCAAGCAATAACATTGAGAAAGTACCCAGCAGAGATGTCCCTAGCCACGTGGGTATGCTTTATTGGTGCAATTCAAAGCAGTGCAGTTACTGCTTACATGGAGCGTGGCTCCCCTCAAGTCTGGATTCTGGCTCCTGATTCCAGGCTTCTTGCCTGTTTATATGCGTTCTATGTGCAAGGGCTGGTGATCAAAACAACAGGTCCAGTATTTGTGACTGCTTTCAATCCCCTGCGTATGATCATAGTCACAGCCTTGGCCTCCATACTCCTCTCTGAGAAGCTCTACCTAGGAAGTGTTATTGGAGGAGTAGTGGTGGTTGTAGGGCTTTATTTGGTTGTGTGGGGAAAATCTAAAGAAAAGAAAAGTATCAAGAATACTACAATGCTGCTGCCACCATCCCCTGAAAAAGATATCCAACAACAACAGCAGCTACCAGTTACTGTTCCAAGAAATTACGATGCCAGCAACATCAACAACAACAATAACAATAACAATGATGGTGATGATAACGGTCAACAAGTGATGGTAGTAGTTGGAATCAAGAACAGCAACGTTGAAGCAAGCAGATCATCAAGTACTGCTGATTGA 1224 0.4338 MGEELSYCENVRAWFSKSKAFLLILSLQFGSAGMYIITMDALNKGMSHYVFVVYRNVVATVALGPFAFFLERKVRPKMTPRIFAEILALAFIEIILDQCFTFLGMKLTSASFASAVMNSVPSITFVLAIIFRLERMKIRNIGCQAKVIGTAVSLGGAILMAMYKGPILNIVKSSTTHVAHTGNNANTTSDHWLMGAIFILIGCAGFSGFYILQAITLRKYPAEMSLATWVCFIGAIQSSAVTAYMERGSPQVWILAPDSRLLACLYAFYVQGLVIKTTGPVFVTAFNPLRMIIVTALASILLSEKLYLGSVIGGVVVVVGLYLVVWGKSKEKKSIKNTTMLLPPSPEKDIQQQQQLPVTVPRNYDASNINNNNNNNNDGDDNGQQVMVVVGIKNSNVEASRSSSTAD 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241698g00008 407 MobiDBLite consensus disorder prediction 363 383 - -
Stsc241698g00008 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 229 331 - -
Stsc241698g00008 407 PANTHER WAT1-RELATED PROTEIN 20 338 IPR030184 GO:0016020|GO:0022857
Stsc241698g00008 407 Pfam EamA-like transporter family 194 325 IPR000620 GO:0016020
Stsc241698g00008 407 Pfam EamA-like transporter family 31 160 IPR000620 GO:0016020
Stsc241698g00008 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241698g00008 Stsc-Chr241698 50659 56270 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241698g00008 12 377 Nodulin-like Gene Family AT2G37460 44.681 3.35e-108 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241698g00008 - - gmx:100813852 518.079