LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc241697g00023	ATGGGTGCAGCGCTACTCCCAGATCTCGGGACTGAGATTCTCATCCCTGTCTGCGCCGTCATAGGTATAGCCTTTGCCCTCTTCCAGTGGCTGCTTGTCTCCAAGGTCAAGCTCTCCGCCGCCAGAGACGCTTCTCCCAACGCCGCCCCCAAGAATGGCTACAACGATTACCTCATCGAAGAGGAGGAAGGCATCAACGACCACAACGTCGTTATCAAATGCGCTGAAATCCAGAGCGCCATTTCCGAAGGAGCAACCTCTTTTCTTTTCACTGAGTACAAGTATGTGGGAATCTTCATGGTGGCTTTTGCCATCTTGATATTCCTCTTCCTTGGCTCTGTGAAAGGATTCAGCACAAGCAACCAGCCTTGCACCTATGACGAAACTAAGACGTGTAAACCAGCTCTGGCTACTGCCCTTTTTAGTACCATTTCTTTCTTGCTCGGTGGCATCACATCGCTAGTGTCTGGTTTCCTTGGAATGAAAATTGCAACTTATGCTAATGCCAGAACTACTTTGGAGGCAAGAAAGGGTGTTGGAAAGGCCTTCATCACTGCATTTAGATCTGGTGCAGTTATGGGATTTCTCCTTGCTGCAAATGGTCTTTTGGTTCTTTACATTGCCATCAATGTTTTCAAGATCTATTATGGCGATGACTGGGAAGGTCTTTTCGAGGCCATAACTGGTTATGGTCTTGGTGGGTCTTCTATGGCTCTGTTTGGCAGAGTTGGTGGAGGTATCTACACTAAGGCTGCTGATGTTGGTGCTGATCTTGTTGGCAAGGTTGAAAGGAACATTCCTGAGGATGACCCAAGAAATCCTGCTGTGATTGCCGATAATGTTGGTGATAATGTTGGGGATATTGCTGGCATGGGATCTGATCTCTTTGGTTCATATGCTGAGTCATCTTGTGCTGCCCTTGTTGTTGCTTCAATCTCCTCTTTTGGGGTGAACCATGAGTTTACTGCTATGTTGTACCCCCTCATTGTCAGCTCTGTGGGTATCATAGTCTGTTTGCTTACCACCTTATTTGCAACTGACTTTTTTGAGATAAAGGCTGTGAAGGAAATTGAGCCAGCATTGAAGAAACAGCTCATTATTTCCACTGCTTTAATGACCATTGGGATTGCAATTGTTAGTTGGGTTGCACTACCATCTTCCTTCACTATCTTCAATTTTGGAATCCAGAAAGATGTCAAGAATTGGCAACTATTTTTGTGTGTTGCTGTTGGTCTTTGGGCAGGGCTTATTATTGGATTTGTAACTGAGTACTATACCAGCAATGCATACAGCCCTGTGCAAGATGTCGCAGATTCCTGCAGGACTGGTGCTGCCACTAATGTTATCTTTGGACTTGCCTTGGGATACAAGTCTGTCATTATCCCAATTTTTGCTATTGCCATTAGTATTTTTGNNNNNNNNNNCGGTATTGCTGTTGCAGCACTTGGGATGCTGAGTACCATAGCCACTGGATTGGCCATTGATGCTTATGGTCCAATCAGTGACAATGCTGGAGGTATTGCTGAGATGGCTGGCATGAGCCACAGAATTAGAGAGAGAACAGATGCCCTTGATGCTGCTGGAAACACAACTGCTGCTATTGGAAAGGGGTTTGCAATTGGTTCTGCCGCGCTTGTGTCTCTGGCTCTCTTTGGTGCCTTTGTGAGCCGTGCTGCTATCACAACTGTTGATGTGTTGACTCCAAAGGTTTTCATTGGTTTGCTTGTTGGTGCAATGCTTCCATACTGGTTTTCTGCCATGACCATGAAGAGTGTGGGAAGTGCTGCGCTGAAGATGGTTGAGGAAGTGCGCAGGCAATTCAATACCATTCCCGGCCTGATGGAGGGAACTGCCAAGCCTGACTACGCCACATGCGTTAAGATCTCCACTGATGCTTCTATTAAAGAAATGATCCCGCCTGGTGCTCTTGTCATGCTCACACCCCTCATTGTTGGTATCTTCTTTGGAGTGGAAACACTTTCTGGTGTCCTTGCTGGATCTCTGGTGTCTGGTGTACAGATTGCTATCTCCGCATCCAACACTGGTGGTGCTTGGGACAATGCCAAGAAGTACATTGAGGCTGGTGCATCTGATCATGCGAGAAGCCTTGGTCCAAAGGGGTCAGATTGTCACAAAGCAGCTGTGATTGGAGACACTATTGGGGACCCACTGAAGGACACATCTGGACCTTCACTCAACATCCTCATCAAACTCATGGCCGTTGAGTCCCTTGTCTTTGCTCCCTTCTTTGCTACCCATGGTGGCCTCCTCTTCAAGATCTAA	2283	0.4674	MGAALLPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLSAARDASPNAAPKNGYNDYLIEEEEGINDHNVVIKCAEIQSAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVKGFSTSNQPCTYDETKTCKPALATALFSTISFLLGGITSLVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINVFKIYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGVNHEFTAMLYPLIVSSVGIIVCLLTTLFATDFFEIKAVKEIEPALKKQLIISTALMTIGIAIVSWVALPSSFTIFNFGIQKDVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFXXXXGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAITTVDVLTPKVFIGLLVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASDHARSLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKI	760

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc241697g00023	760	PIRSF	H+-PPtase	11	759	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Stsc241697g00023	760	PANTHER	K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP	6	751	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Stsc241697g00023	760	NCBIfam	V-type H(+)-translocating pyrophosphatase	11	756	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Stsc241697g00023	760	Pfam	Inorganic H+ pyrophosphatase	23	746	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Stsc241697g00023	760	Hamap	Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA].	9	751	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc241697g00023	Stsc-Chr241697	122676	127202	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc241697g00023	4	624	Primary Pumps ATPases	AT1G15690	87.122	0.0	1105

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc241697g00023	K23025		-	gmx:100775864	1400.57