Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241696g00041 ATGAGAGGAACAACCTCCATCAACATGTCACTTCTTCTTCTTCCTTTTCTTCTCATGCTAACACTTGCAACATCTTCTGATGTTAAGCTGCTTATGACATTCAAGAACTCCCATGTCTCCTCCGATCCAAACAACTTCCTCGCTCACTGGTCCACCTCCAACTCAAAGCCCTGCACCTGGAGGGGTGTCACGTGCTCCGCCCAAGGTCAACTCACAACCATAAACCTAACAGGTGCTGGCCTCGTCGGCACCCTTCACCTCCCAACTCTCACGGCTTTGCCTTCCTTGCAGCACCTTATATTGCGTCAAAACTACTTCTCCTTAGGGAACCTCTCTGTCTCTCCCTTCTGCGCTCTCCAAACGCTTGATCTTTCCTCCAACAACTTCTCTGGAGACTTCCCCTTCCACCTCCTTCTTCCATGTCCAGCTCTCACTTCTCTCAACGTCTCAAGGAATCTCATTACTGGCGTCACACCAAAGGAACCTGCTTTTCGCTTTGGTGCTTCTCTTCTTCACCTTGACTTGTCCAGGAACCAGCTTTCCCAGCCTCAGATTTTGACTTACACTCTCTCCAATTGTCAGGCTTTGCTTCTGCTTAACTTATCTGACAACCGAATCTCCGCTCAACTCACTGAAAATATTCTTACTGCTGCTTGTGCCAACCTCACTACTCTGGACCTCTCCCATAATCACCTCTCCGGGGAGTTGCCGCACAGTTTTGTGGTGGACTCTTTGCAGCTTTTGGATCTTTCTGGTAACAATTTTTCAGGGGTGTTCTCAAGGTTTGGTTTTGGGAGCTGCAGGAACCTTGTTTGGTTGAGTTTATCTCACAATGCGCTCTCTGGTGGGGAGTTTCCAAGCAGCTTGAGGAATTGCCAGGCTCTGGAGACTCTGGATCTTTCTCACAATGAGCTTGGACCAAATATCCCCGGGTCTCTTCTTGCTGGTCTCAAGAGCCTCAAGGAACTGTTTCTGGGGAGAAATAATTTCAATGGGGAGATTCCTTCTGAGCTTGGAATGGCTTGTGATTCCCTTCTTCAGGTTCTTGACCTCAGTTCCAATGGCTTTACCGGCACCATCCCCTCTGCGCTTTGCTCTTCTTCCTCGCCTCTCGAAAAGATGCTTCTTGCAGACAATTACCTGGAAGGGAGGGTGCCTGCTGAGCTTGGTGGCTGCAAGAATTTGAGGACAATTGATTTCAGCTTCAACAACTTGAATGGCCCTATACCCTCTCAACTTTGGTCCCTTGCCAATCTTACAGACTTGATTATGTGGGCTAACAACCTTACTGGAGAGATTCATCAAGGCATATGCAGCAATAGTGGAAAGCTAGAGACCTTGATTCTTAACAACAATTTGATTTCAGGCTCCATTCCAAGCTCAATTGCCAATTGCACCAATATGGTTTGGGTGTCGCTGGCTAGCAACCACATTACCGGGGAAATACCTGCCGGTATTGGGAATCTAAAGAGACTTGCCATCCTCCAATTAGGCAACAATTCACTTGCTGGACAGATCCCACCAGAGCTTGGGGAATGTAAAAGCCTCATATGGTTGGATTTGAATAGTAACAACCTCACTGGTACTATCCCCTCTGATCTTGCCAATCAAGCTGGCCTGGTTATGCCTGGAACTGTTTCTGGGAAGGAATTTGCATTTGTTAGAAATGAAGGTGGGACAAGCTGCAGGGGAGCCGGCGGTTTAGTTGAATTCGAAGATATCAAGGCTTCCAGGCTTGAGAGTTTTCCTATGGTGCATTCCTGCCCATTAACTCGAATATACTCCGGCGTCACAGTTTATACATTTTCCAAGAATGGCAGCATGATCTACCTTGATCTTTCCTACAATTTCTTGTCTGGAAGCATTCCTGCAAGCTTAGGGGCAATGTCCTATCTACAGGTCCTAAATATGGGACACAATAAGCTAAGTGGGAACATTCCAGACAGCTTTGGTGGTCTAAAAGCCATAGGAGTGCTTGATCTCTCACATAATAACCTTCAAGGATTCATCCCTGCTTCATTAGGAACTCTGTCTTTTCTGAGTGACCTTGATGTCTCCAATAATAACCTCACAGGAGCCATTCCCCCCGGTGGTCAGCTAACAACTTTCCCTTCATCTAGATATGAAAACAACTCTAATCTCTGTGGTGTTCCTTTGCCACCTTGCCAAGGCACTTCGAATCGAAATCACTTGCCAGGTTACCATGCTTGGAAGAAGAAGCAACCTATTGCAGTTGGGATAATCATTGGCCTTGTTTTCTTTGTCTTGTTCTTTCTTGTTTTTGTTGTTGCTTTGTATCAAGTCAAGAAGTATCATTGGAAGGAGGAACAGAGAGAAAAGTACATAGAAAGTCTTCCAACTTCAGGTAGCAGCAGTTGGAAACTATCAAGCATTCCTGAGCCCCTCAGCATCAATGTTGCCACCTTTGAGAAACCTCTGCGAAAGTTGACGTTCGCGCATCTTCTCGAGGCTACTAACGGTTTCAGTGCTGAAACCTTGATAGGGTCTGGTGGTTTTGGTGAGGTGTATAAGGCTAAGCTCAAAGATGGTTGTGTTGTTGCTATCAAGAAGCTTATTCATGTAACAGGTCAGGGAGACAGAGAGTTCATGGCTGAAATGGAAACCATTGGCAAGATTAAGCACAGAAACCTTGTTCCACTGCTGGGTTACTGTAAAATTGGAGAGGAGAGGCTTCTTGTGTATGAGTACATGAAATGGGGAAGTCTAGAGGCTGTTCTTCATGAGGGTGGCAGAGGACTTGATTGGGCAGCAAGAAAGAAGATCGCCATAGGGTCAGCAAGAGGACTTGCATTTCTACACCATAGTTGTATTCCTCACATCATACACCGAGACATGAAGTCAAGCAATATTCTTCTTGATGAAAATTTTGAGGCCAGAGTTTCGGATTTCGGGATGGCAAGATTGGTTAATGCCCTGGACACACATCTGAGTGTGAGCACACTTGCTGGAACGCCGGGTTATGTACCTCCTGAGTACTATCAGAGCTTTAGGTGCACAACTAAGGGTGATGTTTATAGTTATGGTGTCATTCTGCTTGAGCTTTTATCTGGAAAGAGGCCTATTGACTCGTCTGAGTTTGGTGATGACAACAATCTTGTTGGATGGTGTAAGCAACTTCATAAGGAGAAAAGAAGTAGTGAGATTCTAGATCCTGACTTAATCAGGCAAGCATCTAGTGAAGGTGAACTCTACCAGTGTTTGAGAATTGCCTTTGAGTGTTTAGAGGAGAGACCGTATAGGAGACCAACTATGATTCAAGTTATGGCAATGTTCAAGGAGCTTCAAGCTGATACAGATAATGATGTCCTTGATGGCTTCTCTCTCAAATGCAATGTCATTGAGGAAGCATAA 3372 0.4561 MRGTTSINMSLLLLPFLLMLTLATSSDVKLLMTFKNSHVSSDPNNFLAHWSTSNSKPCTWRGVTCSAQGQLTTINLTGAGLVGTLHLPTLTALPSLQHLILRQNYFSLGNLSVSPFCALQTLDLSSNNFSGDFPFHLLLPCPALTSLNVSRNLITGVTPKEPAFRFGASLLHLDLSRNQLSQPQILTYTLSNCQALLLLNLSDNRISAQLTENILTAACANLTTLDLSHNHLSGELPHSFVVDSLQLLDLSGNNFSGVFSRFGFGSCRNLVWLSLSHNALSGGEFPSSLRNCQALETLDLSHNELGPNIPGSLLAGLKSLKELFLGRNNFNGEIPSELGMACDSLLQVLDLSSNGFTGTIPSALCSSSSPLEKMLLADNYLEGRVPAELGGCKNLRTIDFSFNNLNGPIPSQLWSLANLTDLIMWANNLTGEIHQGICSNSGKLETLILNNNLISGSIPSSIANCTNMVWVSLASNHITGEIPAGIGNLKRLAILQLGNNSLAGQIPPELGECKSLIWLDLNSNNLTGTIPSDLANQAGLVMPGTVSGKEFAFVRNEGGTSCRGAGGLVEFEDIKASRLESFPMVHSCPLTRIYSGVTVYTFSKNGSMIYLDLSYNFLSGSIPASLGAMSYLQVLNMGHNKLSGNIPDSFGGLKAIGVLDLSHNNLQGFIPASLGTLSFLSDLDVSNNNLTGAIPPGGQLTTFPSSRYENNSNLCGVPLPPCQGTSNRNHLPGYHAWKKKQPIAVGIIIGLVFFVLFFLVFVVALYQVKKYHWKEEQREKYIESLPTSGSSSWKLSSIPEPLSINVATFEKPLRKLTFAHLLEATNGFSAETLIGSGGFGEVYKAKLKDGCVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSLEAVLHEGGRGLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNILLDENFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDSSEFGDDNNLVGWCKQLHKEKRSSEILDPDLIRQASSEGELYQCLRIAFECLEERPYRRPTMIQVMAMFKELQADTDNDVLDGFSLKCNVIEEA 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241696g00041 1123 FunFam Brassinosteroid LRR receptor kinase 904 1103 - -
Stsc241696g00041 1123 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 438 530 - -
Stsc241696g00041 1123 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 264 1100 - -
Stsc241696g00041 1123 Coils Coil 1120 1123 - -
Stsc241696g00041 1123 SUPERFAMILY L domain-like 422 722 - -
Stsc241696g00041 1123 ProSitePatterns Protein kinases ATP-binding region signature. 834 857 IPR017441 GO:0005524
Stsc241696g00041 1123 Gene3D Ribonuclease Inhibitor 20 731 IPR032675 -
Stsc241696g00041 1123 Gene3D Phosphorylase Kinase; domain 1 791 903 - -
Stsc241696g00041 1123 Gene3D Transferase(Phosphotransferase) domain 1 904 1115 - -
Stsc241696g00041 1123 FunFam serine/threonine-protein kinase BRI1-like 2 789 903 - -
Stsc241696g00041 1123 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Stsc241696g00041 1123 Pfam Protein kinase domain 830 1096 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241696g00041 1123 SUPERFAMILY L domain-like 25 258 - -
Stsc241696g00041 1123 Gene3D - 546 602 - -
Stsc241696g00041 1123 Pfam Leucine rich repeat 221 280 IPR001611 GO:0005515
Stsc241696g00041 1123 Pfam Leucine rich repeat 632 690 IPR001611 GO:0005515
Stsc241696g00041 1123 ProSiteProfiles Protein kinase domain profile. 828 1101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241696g00041 1123 SUPERFAMILY L domain-like 219 439 - -
Stsc241696g00041 1123 ProSitePatterns Serine/Threonine protein kinases active-site signature. 947 959 IPR008271 GO:0004672|GO:0006468
Stsc241696g00041 1123 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 118 386 - -
Stsc241696g00041 1123 SUPERFAMILY Protein kinase-like (PK-like) 809 1098 IPR011009 -
Stsc241696g00041 1123 Pfam Leucine Rich repeat 292 307 IPR001611 GO:0005515
Stsc241696g00041 1123 PRINTS Leucine-rich repeat signature 222 235 - -
Stsc241696g00041 1123 PRINTS Leucine-rich repeat signature 292 305 - -
Stsc241696g00041 1123 SMART LRR_typ_2 317 341 IPR003591 -
Stsc241696g00041 1123 SMART LRR_typ_2 653 676 IPR003591 -
Stsc241696g00041 1123 SMART LRR_typ_2 677 700 IPR003591 -
Stsc241696g00041 1123 SMART LRR_typ_2 629 652 IPR003591 -
Stsc241696g00041 1123 SMART LRR_typ_2 292 316 IPR003591 -
Stsc241696g00041 1123 SMART LRR_typ_2 242 265 IPR003591 -
Stsc241696g00041 1123 SMART LRR_typ_2 416 440 IPR003591 -
Stsc241696g00041 1123 SMART LRR_typ_2 489 513 IPR003591 -
Stsc241696g00041 1123 SMART serkin_6 828 1098 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241696g00041 1123 Pfam Brassinosteroid receptor island domain 539 603 IPR045381 -
Stsc241696g00041 1123 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 601 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241696g00041 Stsc-Chr241696 153924 157527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241696g00041 26 1123 Receptor kinase-like Gene Family AT1G55610 60.084 0.0 1367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Stsc241696g00041 Pkinase 3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241696g00041 - - tcc:18593159 1387.09