Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc241696g00041 | ATGAGAGGAACAACCTCCATCAACATGTCACTTCTTCTTCTTCCTTTTCTTCTCATGCTAACACTTGCAACATCTTCTGATGTTAAGCTGCTTATGACATTCAAGAACTCCCATGTCTCCTCCGATCCAAACAACTTCCTCGCTCACTGGTCCACCTCCAACTCAAAGCCCTGCACCTGGAGGGGTGTCACGTGCTCCGCCCAAGGTCAACTCACAACCATAAACCTAACAGGTGCTGGCCTCGTCGGCACCCTTCACCTCCCAACTCTCACGGCTTTGCCTTCCTTGCAGCACCTTATATTGCGTCAAAACTACTTCTCCTTAGGGAACCTCTCTGTCTCTCCCTTCTGCGCTCTCCAAACGCTTGATCTTTCCTCCAACAACTTCTCTGGAGACTTCCCCTTCCACCTCCTTCTTCCATGTCCAGCTCTCACTTCTCTCAACGTCTCAAGGAATCTCATTACTGGCGTCACACCAAAGGAACCTGCTTTTCGCTTTGGTGCTTCTCTTCTTCACCTTGACTTGTCCAGGAACCAGCTTTCCCAGCCTCAGATTTTGACTTACACTCTCTCCAATTGTCAGGCTTTGCTTCTGCTTAACTTATCTGACAACCGAATCTCCGCTCAACTCACTGAAAATATTCTTACTGCTGCTTGTGCCAACCTCACTACTCTGGACCTCTCCCATAATCACCTCTCCGGGGAGTTGCCGCACAGTTTTGTGGTGGACTCTTTGCAGCTTTTGGATCTTTCTGGTAACAATTTTTCAGGGGTGTTCTCAAGGTTTGGTTTTGGGAGCTGCAGGAACCTTGTTTGGTTGAGTTTATCTCACAATGCGCTCTCTGGTGGGGAGTTTCCAAGCAGCTTGAGGAATTGCCAGGCTCTGGAGACTCTGGATCTTTCTCACAATGAGCTTGGACCAAATATCCCCGGGTCTCTTCTTGCTGGTCTCAAGAGCCTCAAGGAACTGTTTCTGGGGAGAAATAATTTCAATGGGGAGATTCCTTCTGAGCTTGGAATGGCTTGTGATTCCCTTCTTCAGGTTCTTGACCTCAGTTCCAATGGCTTTACCGGCACCATCCCCTCTGCGCTTTGCTCTTCTTCCTCGCCTCTCGAAAAGATGCTTCTTGCAGACAATTACCTGGAAGGGAGGGTGCCTGCTGAGCTTGGTGGCTGCAAGAATTTGAGGACAATTGATTTCAGCTTCAACAACTTGAATGGCCCTATACCCTCTCAACTTTGGTCCCTTGCCAATCTTACAGACTTGATTATGTGGGCTAACAACCTTACTGGAGAGATTCATCAAGGCATATGCAGCAATAGTGGAAAGCTAGAGACCTTGATTCTTAACAACAATTTGATTTCAGGCTCCATTCCAAGCTCAATTGCCAATTGCACCAATATGGTTTGGGTGTCGCTGGCTAGCAACCACATTACCGGGGAAATACCTGCCGGTATTGGGAATCTAAAGAGACTTGCCATCCTCCAATTAGGCAACAATTCACTTGCTGGACAGATCCCACCAGAGCTTGGGGAATGTAAAAGCCTCATATGGTTGGATTTGAATAGTAACAACCTCACTGGTACTATCCCCTCTGATCTTGCCAATCAAGCTGGCCTGGTTATGCCTGGAACTGTTTCTGGGAAGGAATTTGCATTTGTTAGAAATGAAGGTGGGACAAGCTGCAGGGGAGCCGGCGGTTTAGTTGAATTCGAAGATATCAAGGCTTCCAGGCTTGAGAGTTTTCCTATGGTGCATTCCTGCCCATTAACTCGAATATACTCCGGCGTCACAGTTTATACATTTTCCAAGAATGGCAGCATGATCTACCTTGATCTTTCCTACAATTTCTTGTCTGGAAGCATTCCTGCAAGCTTAGGGGCAATGTCCTATCTACAGGTCCTAAATATGGGACACAATAAGCTAAGTGGGAACATTCCAGACAGCTTTGGTGGTCTAAAAGCCATAGGAGTGCTTGATCTCTCACATAATAACCTTCAAGGATTCATCCCTGCTTCATTAGGAACTCTGTCTTTTCTGAGTGACCTTGATGTCTCCAATAATAACCTCACAGGAGCCATTCCCCCCGGTGGTCAGCTAACAACTTTCCCTTCATCTAGATATGAAAACAACTCTAATCTCTGTGGTGTTCCTTTGCCACCTTGCCAAGGCACTTCGAATCGAAATCACTTGCCAGGTTACCATGCTTGGAAGAAGAAGCAACCTATTGCAGTTGGGATAATCATTGGCCTTGTTTTCTTTGTCTTGTTCTTTCTTGTTTTTGTTGTTGCTTTGTATCAAGTCAAGAAGTATCATTGGAAGGAGGAACAGAGAGAAAAGTACATAGAAAGTCTTCCAACTTCAGGTAGCAGCAGTTGGAAACTATCAAGCATTCCTGAGCCCCTCAGCATCAATGTTGCCACCTTTGAGAAACCTCTGCGAAAGTTGACGTTCGCGCATCTTCTCGAGGCTACTAACGGTTTCAGTGCTGAAACCTTGATAGGGTCTGGTGGTTTTGGTGAGGTGTATAAGGCTAAGCTCAAAGATGGTTGTGTTGTTGCTATCAAGAAGCTTATTCATGTAACAGGTCAGGGAGACAGAGAGTTCATGGCTGAAATGGAAACCATTGGCAAGATTAAGCACAGAAACCTTGTTCCACTGCTGGGTTACTGTAAAATTGGAGAGGAGAGGCTTCTTGTGTATGAGTACATGAAATGGGGAAGTCTAGAGGCTGTTCTTCATGAGGGTGGCAGAGGACTTGATTGGGCAGCAAGAAAGAAGATCGCCATAGGGTCAGCAAGAGGACTTGCATTTCTACACCATAGTTGTATTCCTCACATCATACACCGAGACATGAAGTCAAGCAATATTCTTCTTGATGAAAATTTTGAGGCCAGAGTTTCGGATTTCGGGATGGCAAGATTGGTTAATGCCCTGGACACACATCTGAGTGTGAGCACACTTGCTGGAACGCCGGGTTATGTACCTCCTGAGTACTATCAGAGCTTTAGGTGCACAACTAAGGGTGATGTTTATAGTTATGGTGTCATTCTGCTTGAGCTTTTATCTGGAAAGAGGCCTATTGACTCGTCTGAGTTTGGTGATGACAACAATCTTGTTGGATGGTGTAAGCAACTTCATAAGGAGAAAAGAAGTAGTGAGATTCTAGATCCTGACTTAATCAGGCAAGCATCTAGTGAAGGTGAACTCTACCAGTGTTTGAGAATTGCCTTTGAGTGTTTAGAGGAGAGACCGTATAGGAGACCAACTATGATTCAAGTTATGGCAATGTTCAAGGAGCTTCAAGCTGATACAGATAATGATGTCCTTGATGGCTTCTCTCTCAAATGCAATGTCATTGAGGAAGCATAA | 3372 | 0.4561 | MRGTTSINMSLLLLPFLLMLTLATSSDVKLLMTFKNSHVSSDPNNFLAHWSTSNSKPCTWRGVTCSAQGQLTTINLTGAGLVGTLHLPTLTALPSLQHLILRQNYFSLGNLSVSPFCALQTLDLSSNNFSGDFPFHLLLPCPALTSLNVSRNLITGVTPKEPAFRFGASLLHLDLSRNQLSQPQILTYTLSNCQALLLLNLSDNRISAQLTENILTAACANLTTLDLSHNHLSGELPHSFVVDSLQLLDLSGNNFSGVFSRFGFGSCRNLVWLSLSHNALSGGEFPSSLRNCQALETLDLSHNELGPNIPGSLLAGLKSLKELFLGRNNFNGEIPSELGMACDSLLQVLDLSSNGFTGTIPSALCSSSSPLEKMLLADNYLEGRVPAELGGCKNLRTIDFSFNNLNGPIPSQLWSLANLTDLIMWANNLTGEIHQGICSNSGKLETLILNNNLISGSIPSSIANCTNMVWVSLASNHITGEIPAGIGNLKRLAILQLGNNSLAGQIPPELGECKSLIWLDLNSNNLTGTIPSDLANQAGLVMPGTVSGKEFAFVRNEGGTSCRGAGGLVEFEDIKASRLESFPMVHSCPLTRIYSGVTVYTFSKNGSMIYLDLSYNFLSGSIPASLGAMSYLQVLNMGHNKLSGNIPDSFGGLKAIGVLDLSHNNLQGFIPASLGTLSFLSDLDVSNNNLTGAIPPGGQLTTFPSSRYENNSNLCGVPLPPCQGTSNRNHLPGYHAWKKKQPIAVGIIIGLVFFVLFFLVFVVALYQVKKYHWKEEQREKYIESLPTSGSSSWKLSSIPEPLSINVATFEKPLRKLTFAHLLEATNGFSAETLIGSGGFGEVYKAKLKDGCVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSLEAVLHEGGRGLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNILLDENFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDSSEFGDDNNLVGWCKQLHKEKRSSEILDPDLIRQASSEGELYQCLRIAFECLEERPYRRPTMIQVMAMFKELQADTDNDVLDGFSLKCNVIEEA | 1123 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc241696g00041 | 1123 | FunFam | Brassinosteroid LRR receptor kinase | 904 | 1103 | - | - | |
Stsc241696g00041 | 1123 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 438 | 530 | - | - | |
Stsc241696g00041 | 1123 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 264 | 1100 | - | - | |
Stsc241696g00041 | 1123 | Coils | Coil | 1120 | 1123 | - | - | |
Stsc241696g00041 | 1123 | SUPERFAMILY | L domain-like | 422 | 722 | - | - | |
Stsc241696g00041 | 1123 | ProSitePatterns | Protein kinases ATP-binding region signature. | 834 | 857 | IPR017441 | GO:0005524 | |
Stsc241696g00041 | 1123 | Gene3D | Ribonuclease Inhibitor | 20 | 731 | IPR032675 | - | |
Stsc241696g00041 | 1123 | Gene3D | Phosphorylase Kinase; domain 1 | 791 | 903 | - | - | |
Stsc241696g00041 | 1123 | Gene3D | Transferase(Phosphotransferase) domain 1 | 904 | 1115 | - | - | |
Stsc241696g00041 | 1123 | FunFam | serine/threonine-protein kinase BRI1-like 2 | 789 | 903 | - | - | |
Stsc241696g00041 | 1123 | Pfam | Leucine rich repeat N-terminal domain | 26 | 66 | IPR013210 | - | |
Stsc241696g00041 | 1123 | Pfam | Protein kinase domain | 830 | 1096 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc241696g00041 | 1123 | SUPERFAMILY | L domain-like | 25 | 258 | - | - | |
Stsc241696g00041 | 1123 | Gene3D | - | 546 | 602 | - | - | |
Stsc241696g00041 | 1123 | Pfam | Leucine rich repeat | 221 | 280 | IPR001611 | GO:0005515 | |
Stsc241696g00041 | 1123 | Pfam | Leucine rich repeat | 632 | 690 | IPR001611 | GO:0005515 | |
Stsc241696g00041 | 1123 | ProSiteProfiles | Protein kinase domain profile. | 828 | 1101 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc241696g00041 | 1123 | SUPERFAMILY | L domain-like | 219 | 439 | - | - | |
Stsc241696g00041 | 1123 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 947 | 959 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc241696g00041 | 1123 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 118 | 386 | - | - | |
Stsc241696g00041 | 1123 | SUPERFAMILY | Protein kinase-like (PK-like) | 809 | 1098 | IPR011009 | - | |
Stsc241696g00041 | 1123 | Pfam | Leucine Rich repeat | 292 | 307 | IPR001611 | GO:0005515 | |
Stsc241696g00041 | 1123 | PRINTS | Leucine-rich repeat signature | 222 | 235 | - | - | |
Stsc241696g00041 | 1123 | PRINTS | Leucine-rich repeat signature | 292 | 305 | - | - | |
Stsc241696g00041 | 1123 | SMART | LRR_typ_2 | 317 | 341 | IPR003591 | - | |
Stsc241696g00041 | 1123 | SMART | LRR_typ_2 | 653 | 676 | IPR003591 | - | |
Stsc241696g00041 | 1123 | SMART | LRR_typ_2 | 677 | 700 | IPR003591 | - | |
Stsc241696g00041 | 1123 | SMART | LRR_typ_2 | 629 | 652 | IPR003591 | - | |
Stsc241696g00041 | 1123 | SMART | LRR_typ_2 | 292 | 316 | IPR003591 | - | |
Stsc241696g00041 | 1123 | SMART | LRR_typ_2 | 242 | 265 | IPR003591 | - | |
Stsc241696g00041 | 1123 | SMART | LRR_typ_2 | 416 | 440 | IPR003591 | - | |
Stsc241696g00041 | 1123 | SMART | LRR_typ_2 | 489 | 513 | IPR003591 | - | |
Stsc241696g00041 | 1123 | SMART | serkin_6 | 828 | 1098 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc241696g00041 | 1123 | Pfam | Brassinosteroid receptor island domain | 539 | 603 | IPR045381 | - | |
Stsc241696g00041 | 1123 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 601 | 721 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc241696g00041 | Stsc-Chr241696 | 153924 | 157527 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc241696g00041 | 26 | 1123 | Receptor kinase-like Gene Family | AT1G55610 | 60.084 | 0.0 | 1367 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-Xb-1 | Stsc241696g00041 | Pkinase | 3e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc241696g00041 | - | - | tcc:18593159 | 1387.09 |