Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241696g00021 ATGGCCTTGAAAGAATTAAGTTGTCCCACCTTTGAGCTATGTCTTTCGTTCTTTTCTAGCATTATTACTATTATTATTGTGCTTAAGCTGAGAAGAAGTGTGAGAGTGAAAAGCAAAGAGAATATTACTAAGCTGCCTCCATCACCAAGAAAGTTACCCATAATTGGGAATCTTCATCAGATAGGAGCATTGCCATATCGTTCCTTCAAAGCCCTATCAGACAAGCACGGTGATGTGATGTTGTTACAGTTGGGGCACATTCCAACTGTGGTGGTTTCATCAGCACAAGTGGTGAACGAAATCATGAAAGGACACGACTTAGCACTCTCGAACAGAGGCCAAAGCAGAGCCACGAATGCCTTGCTGTACGGATCCAATGATATTGGATTTGGAAACTACGGAGAAAAGTGGAAGCAGAAAAGAAAGATATGCGTGCGTGAACTGTTGAGCCCTAAGATGGTTGAGTCAGAGTCGATGCGTTTGGTGAGAGAAGGGGCAGTTGCAGAACTGGTTGACAAGGTACGCGAAGGAGCAGGAGCATGCTCATCAGTGAATTTGAGTGAGTTGATCGTTGAAGCAGCTAACAACATCATTTGTAACTCTGCTCTTGGACTCAAGAACGACGCAAAACACAGCGTGAAGGCGTTGGCAAAGAAGGTGATGTTTCAGGTTGGAGTTGTCACCCTTGGGGATCACTTTCCTTGGTTGGCTTGGCTCGATGTTCTCACTGGTCAGCTTCAACAATTCAAGGACACTTTTCAAGTCTTGGATCCCTTGTTTGATGACCTCATTGCTGAGCGCACAAGACAACCACCACCTGCCCATGATGATCAACCACATTTTCTGGACATCCTCATCCAACTTCAACACCCTCCCAATAATAATGCCATTTCCAACACTGACATCAAATCAATTCTCCTGGACATGTTCGTAGCGGGAAGTGAGACAACTTCAGTAACAGTAGAATGGGCAATGTCAGAGCTAATGAAGAATCCAATAGAACTGAAAAAAGTGCAGGAAGAGGTGAGAAGGGTTGTAGGGCAGAAATCAAATGTAGAAGAGAGCAAGGTGAAGGAAATGGAGTACCTAAAATGTGTGGTGAAGGAGACTCTAAGGTTGCATCCAGCTGCACCTCTCTTGGTACCAAGAGTGGCAACACGCCATGTGAAACTCGGAGGATACGACATCCAAGCAAAGACAAAATTGTACGTGAACGTATGGGCTATCCAGAGGGACCCTCAAGTGTGGGACGCCCCGGAAGAGTTCATTCCAGAGAGGCATCGCCATAGTAACACCAACACTCAAGACTTTAAGCTTATCCCATTTGGTTTCGGCAGAAGAGGCTGCCCTGGAATGAATTTTGGCCTTGCTTCTGTTGAGTATATGCTCGCTAACCTTCTCTATTACTTCAATTGGGAATCTCCACAAGCCATAGATATGACTGAGATATTTGGCCTCGTTGCCTCCAAAAGAATCCCTCTTCATCTTAAGCCTATCCCATTCTCATTCGAATAG 1515 0.4508 MALKELSCPTFELCLSFFSSIITIIIVLKLRRSVRVKSKENITKLPPSPRKLPIIGNLHQIGALPYRSFKALSDKHGDVMLLQLGHIPTVVVSSAQVVNEIMKGHDLALSNRGQSRATNALLYGSNDIGFGNYGEKWKQKRKICVRELLSPKMVESESMRLVREGAVAELVDKVREGAGACSSVNLSELIVEAANNIICNSALGLKNDAKHSVKALAKKVMFQVGVVTLGDHFPWLAWLDVLTGQLQQFKDTFQVLDPLFDDLIAERTRQPPPAHDDQPHFLDILIQLQHPPNNNAISNTDIKSILLDMFVAGSETTSVTVEWAMSELMKNPIELKKVQEEVRRVVGQKSNVEESKVKEMEYLKCVVKETLRLHPAAPLLVPRVATRHVKLGGYDIQAKTKLYVNVWAIQRDPQVWDAPEEFIPERHRHSNTNTQDFKLIPFGFGRRGCPGMNFGLASVEYMLANLLYYFNWESPQAIDMTEIFGLVASKRIPLHLKPIPFSFE 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241696g00021 504 CDD CYP71-like 75 494 - -
Stsc241696g00021 504 PANTHER CYTOCHROME P450 71B11-RELATED 27 499 - -
Stsc241696g00021 504 SUPERFAMILY Cytochrome P450 44 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241696g00021 504 Pfam Cytochrome P450 46 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241696g00021 504 Coils Coil 335 355 - -
Stsc241696g00021 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Stsc241696g00021 504 FunFam Cytochrome P450 83B1 33 497 - -
Stsc241696g00021 504 Gene3D Cytochrome P450 31 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241696g00021 504 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241696g00021 504 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241696g00021 504 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241696g00021 504 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241696g00021 504 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241696g00021 504 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241696g00021 504 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241696g00021 504 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241696g00021 504 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241696g00021 504 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241696g00021 504 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241696g00021 Stsc-Chr241696 58458 60619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241696g00021 32 494 Cytochrome P450 AT4G13290 40.292 2.63e-115 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241696g00021 K20617 K00495 gmx:100785621 556.984