Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241695g00015 ATGGAAAGGGGCAATCTCGAAGAGAAGCTTTTCAAAGGGTATTTAGCAACGTTGCCATGGCTAAAAAGAATCAAGATAGCAATTGGGGCTGCAAAGGGACTTTGTTTCCTTCATGAAGAAGAAAAACCAGTCATATACAGAGATGTTAAAGCCTCAAACATTCTGTTAGACGCTGATTACAATGCGAAGCTCTCAGATTTCGGGTTAGCAATAGATGGACCAGAGGAAGATCAAACACATGTTACAACTCGTGTTATGGGCACCCGCGGTTATGCTGCTCCTGAGTATATCATGACAGGGCATTTGACAACGATGAGCGATGTGTATAGCTACGGAGTTGTTCTGTTAGAGCTACTAACAGGAAGAAAATCAGTGGACAAGAAACGAGGAAGCAGAGAGCAAGATTTGGTAGAGTGGGGAAGGCCAATGCTAAAGGATTCTCTTAAACTGGAGAGAATAATAGACCCAAGACTTGAGGGACAGTACTCAACACAAGCTGCTAGAAAGTTAGCATCATTGGCTTACCAATGCCTTAGCCACCATGCGAAGAACAGGCCTTCAATGCGAACCGTGGTTAAGACCTTGGAGCCTCTCATGGAACTTAACGATATCCCAATTGGTCATTTTGTTTATGTGGCCCCCACTGAACAAGTGGTTGTTGTAACTGACTGTCCTTTTTATAACAACGCCACCAATGTTATTAGTGTTAAGGAAGAAACTCATAATATTAATAATGAAGAGGGAGAGGAGAAAAAAGAGAAGAAGGAGAAGGAGAAGGGTCGCAATAATAATGTAAAGAAGGAACGCAAAAGTCGCAGCCGTAGGTGTAGGGTTAAGCCGATGAGGTCTCGTGCTGTTTACTCTGACACTGCTCTCTATAAGACTCTTGCTACTAGTCCCTATTTTCCCAAACAAGGACCAGTGACAGAAGATAATTGTGATGGAAATAATGGTTCAGTATTGGCAATTTAG 972 0.4259 MERGNLEEKLFKGYLATLPWLKRIKIAIGAAKGLCFLHEEEKPVIYRDVKASNILLDADYNAKLSDFGLAIDGPEEDQTHVTTRVMGTRGYAAPEYIMTGHLTTMSDVYSYGVVLLELLTGRKSVDKKRGSREQDLVEWGRPMLKDSLKLERIIDPRLEGQYSTQAARKLASLAYQCLSHHAKNRPSMRTVVKTLEPLMELNDIPIGHFVYVAPTEQVVVVTDCPFYNNATNVISVKEETHNINNEEGEEKKEKKEKEKGRNNNVKKERKSRSRRCRVKPMRSRAVYSDTALYKTLATSPYFPKQGPVTEDNCDGNNGSVLAI 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241695g00015 323 PANTHER OS01G0588500 PROTEIN-RELATED 1 198 - -
Stsc241695g00015 323 SUPERFAMILY Protein kinase-like (PK-like) 1 216 IPR011009 -
Stsc241695g00015 323 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 1 204 - -
Stsc241695g00015 323 Pfam Protein kinase domain 25 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241695g00015 323 ProSitePatterns Serine/Threonine protein kinases active-site signature. 44 56 IPR008271 GO:0004672|GO:0006468
Stsc241695g00015 323 ProSiteProfiles Protein kinase domain profile. 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241695g00015 323 MobiDBLite consensus disorder prediction 304 323 - -
Stsc241695g00015 323 MobiDBLite consensus disorder prediction 244 265 - -
Stsc241695g00015 323 Gene3D Transferase(Phosphotransferase) domain 1 1 205 - -
Stsc241695g00015 323 MobiDBLite consensus disorder prediction 244 280 - -
Stsc241695g00015 323 Coils Coil 236 263 - -
Stsc241695g00015 323 MobiDBLite consensus disorder prediction 266 280 - -
Stsc241695g00015 323 SMART serkin_6 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241695g00015 Stsc-Chr241695 123439 126118 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241695g00015 1 199 Receptor kinase-like Gene Family AT3G58690 54.146 3.65e-65 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc241695g00015 Pkinase 7.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241695g00015 - - gmx:100790454 415.231