Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241695g00014 ATGAGTGATTTGTCAAATTCCCTCACTGGAATTGGATCAAACATCCACATCTTCACTTACCAGGAGCTCAAAGAGATCACACACAGCTTCAGCAAGAACAATTTCCTCGGCGAAGGCGGATTCGGAAAGGTTTACAAAGGTTTCATTGATGACAAGTTTAAGCCCAGGCTTGAGCCTCAGGTTGTTGCTGTTAAGGCCCTCAACTTGGATGGCAAACAAGGACACAGAGAGTGGTTGGCTGAAGTAATCTTCTTGGGGCAGTTGAAGCATCGCAATCTGGTTAACTTAATTGGATACTGCTGTGAAGATGAGCACAGGCTTCTTGTCTATGAATACATGGAAAGGGGCAATCTCGAAGAGAAGCTTTTCAAAGGGTATTTAGCAACGTTGCCATGGCTAAAAAGAATCAAGATAGCAATTGGGGCTGCAAAGGGACTTTGTTTCCTTCATGAAGAAGAAAAACCAGTCATATACAGAGATGTTAAAGCCTCAAACATTCTGTTAGACGCTGATTACAATGCGAAGCTCTCAGATTTCGGGTTAGCAATAGATGGACCAGAGGAAGATCAAACACATGTTACAACTCGTGTTATGGGCACCCGCGGTTATGCTGCTCCTGAGTATATCATGACAGGGCATTTGACAACGATGAGCGATGTGTATAGCTACGGAGTTGTTCTGTTAGAGCTACTAACAGGAAGAAAATCAGTGGACAAGAAACGAGGAAGCAGAGAGCAAGATTTGGTAGAGTGGGGAAGGCCAATGCTAAAGGATTCTCTTAAACTGGAGAGAATAATAGACCCAAGACTTGAGGGACAGTACTCAACACAAGCTGCTAGAAAGTTAGCATCATTGGCTTACCAATGCCTTAGCCACCATGCGAAGAACAGGCCTTCAATGCGAACCGTGGTTAAGACCTTGGAGCCTCTCATGGAACTTAACGATATCCCAATTGGTCATTTTGTTTATGTGGCCCCCACTGAACAAGTGGTTGTTGTAACTGACTGTCCTTTTTATAACAACGCCACCAATGTTATTAGTGTTAAGGAAGAAACTCATAATATTAATAATGAAGAGGGAGAGGAGAAAAAAGAGAAGAAGGAGAAGGAGAAGGGTCGCAATAATAATGTAAAGAAGGAACGCAAAAGTCGCAGCCGTAGGTGTAGGGTTAAGCCGATGAGGTCTCGTGCTGTTTACTCTGACACTGCTCTCTATAAGACTCTTGCTACTAGTCCCTATTTTCCCAAACAAGGACCAGTGACAGAAGATAATTGTGATGGAAATAATGGTTCAGTATTGGCAATTTAG 1308 0.4312 MSDLSNSLTGIGSNIHIFTYQELKEITHSFSKNNFLGEGGFGKVYKGFIDDKFKPRLEPQVVAVKALNLDGKQGHREWLAEVIFLGQLKHRNLVNLIGYCCEDEHRLLVYEYMERGNLEEKLFKGYLATLPWLKRIKIAIGAAKGLCFLHEEEKPVIYRDVKASNILLDADYNAKLSDFGLAIDGPEEDQTHVTTRVMGTRGYAAPEYIMTGHLTTMSDVYSYGVVLLELLTGRKSVDKKRGSREQDLVEWGRPMLKDSLKLERIIDPRLEGQYSTQAARKLASLAYQCLSHHAKNRPSMRTVVKTLEPLMELNDIPIGHFVYVAPTEQVVVVTDCPFYNNATNVISVKEETHNINNEEGEEKKEKKEKEKGRNNNVKKERKSRSRRCRVKPMRSRAVYSDTALYKTLATSPYFPKQGPVTEDNCDGNNGSVLAI 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241695g00014 435 CDD STKc_IRAK 36 310 - -
Stsc241695g00014 435 FunFam Serine/threonine-protein kinase BIK1 3 112 - -
Stsc241695g00014 435 Pfam Protein tyrosine and serine/threonine kinase 33 307 IPR001245 GO:0004672|GO:0006468
Stsc241695g00014 435 ProSiteProfiles Protein kinase domain profile. 30 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241695g00014 435 Gene3D Transferase(Phosphotransferase) domain 1 113 317 - -
Stsc241695g00014 435 PANTHER OS01G0588500 PROTEIN-RELATED 13 310 - -
Stsc241695g00014 435 SMART serkin_6 30 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241695g00014 435 SUPERFAMILY Protein kinase-like (PK-like) 12 308 IPR011009 -
Stsc241695g00014 435 ProSitePatterns Protein kinases ATP-binding region signature. 36 65 IPR017441 GO:0005524
Stsc241695g00014 435 MobiDBLite consensus disorder prediction 356 392 - -
Stsc241695g00014 435 MobiDBLite consensus disorder prediction 356 377 - -
Stsc241695g00014 435 MobiDBLite consensus disorder prediction 416 435 - -
Stsc241695g00014 435 Coils Coil 348 375 - -
Stsc241695g00014 435 Gene3D Phosphorylase Kinase; domain 1 5 112 - -
Stsc241695g00014 435 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 113 316 - -
Stsc241695g00014 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Stsc241695g00014 435 MobiDBLite consensus disorder prediction 378 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241695g00014 Stsc-Chr241695 123439 126118 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241695g00014 13 311 Receptor kinase-like Gene Family AT3G58690 50.164 1.91e-95 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc241695g00014 PK_Tyr_Ser-Thr 4.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241695g00014 - - gmx:100790454 607.831