Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241695g00006 ATGGACGACGACGACGAGATCCAGTCGCACCCGTCGCCGGCGAGCGGATCCCCGGCGTCGTTGCCGAGGGAGAACGGCCGGATAACGGTCACGGTGGCGGCGCCGGCGCCGCAACAGACACCGCCTCCGGCTCCTAATACCCTGGCATTAGCACTTCCGGTTCAGCAGCAGCCTCCGAGGGGAAACGGCGGCGGAGGAGGGAGGGAGGATTGCTGGAGCGAGGGGGCTACATCGGTGCTGATTGACGCGTGGGGAGAGAGGTATCTTGAACTGAGCAGGGGGAACCTGAAGCAGAAACACTGGAAGGAGGTGGCGGAGATCGTGAGCGCAAGAGAGGACTACGGCAAGACACCGAAGACCGACATCCAGTGCAAGAACCGGATCGACACCGTCAAGAAGAAGTACAAGCTCGAGAAGGCCAAGATCGCCTCCGGCGGAGTACCTAGCAAGTGGCCTTTCTTCGATCGCCTTGAACAGCTGATCGGTCCCACTGCAAAGATCCCCGCCGCCGGTAACACACCCTCCCCGGCGACGCAGAAGGTTCCGGTTGGGATTCCGGTAGGGATCCGCAGCAGCGGTAATAACAATAATCAGTTCCAAAGTCTAAAGAATCAAAATCAGAACCAGAACAAGCAGGTGAAGAACCAGAAGCTCTCGCTCCGGAGGCGTCATCCTTCTCATCCGGATTCAGATTCCTCGGATAGAGACCCGCCGTCTCCGGTGTCCAGTGACAGTTTCCCCCCGGAGAATTATGAGCGGAAGAGGCCGAGGATGGTGCAGCAGAGAGAGATGGAGATGAACCCAAACGGGCCCAAGGGAAGGGAAGGGGGACGAGTGACGAAGGGGAAGGGGAAGGGGAAGGGGAAGAGTTGGGGTTATGCGGTGAGGGAATTGACGCAGGCGATTCTCAAGTTTGGTGAAGCTTACGAGCAAGCGGAGAGTTCGAAGCTGCAGCAGGTGGTGGAGATGGAGAAGCAGAGGATGAAGTTTGCTAAGGACCTTGAGCTGCAGCGGATGCAGTTCTTTATGAAGACACAGTTGGAGATCTCGCAGCTTAAGCTTGGTAGAAAAGGTAGCAACAATAATGCAGGGAATCACCATAGCAGCAACACCAACAACCACCATAACAATAATAGTGACAGTGAGTGA 1149 0.5683 MDDDDEIQSHPSPASGSPASLPRENGRITVTVAAPAPQQTPPPAPNTLALALPVQQQPPRGNGGGGGREDCWSEGATSVLIDAWGERYLELSRGNLKQKHWKEVAEIVSAREDYGKTPKTDIQCKNRIDTVKKKYKLEKAKIASGGVPSKWPFFDRLEQLIGPTAKIPAAGNTPSPATQKVPVGIPVGIRSSGNNNNQFQSLKNQNQNQNKQVKNQKLSLRRRHPSHPDSDSSDRDPPSPVSSDSFPPENYERKRPRMVQQREMEMNPNGPKGREGGRVTKGKGKGKGKSWGYAVRELTQAILKFGEAYEQAESSKLQQVVEMEKQRMKFAKDLELQRMQFFMKTQLEISQLKLGRKGSNNNAGNHHSSNTNNHHNNNSDSE 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241695g00006 382 Gene3D - 72 137 - -
Stsc241695g00006 382 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 42 356 IPR044823 -
Stsc241695g00006 382 FunFam trihelix transcription factor ASIL2 72 137 - -
Stsc241695g00006 382 Pfam Myb/SANT-like DNA-binding domain 69 160 IPR044822 -
Stsc241695g00006 382 Coils Coil 196 223 - -
Stsc241695g00006 382 MobiDBLite consensus disorder prediction 10 24 - -
Stsc241695g00006 382 MobiDBLite consensus disorder prediction 353 382 - -
Stsc241695g00006 382 MobiDBLite consensus disorder prediction 189 215 - -
Stsc241695g00006 382 MobiDBLite consensus disorder prediction 165 292 - -
Stsc241695g00006 382 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241695g00006 Stsc-Chr241695 64990 66768 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241695g00006 1 368 Trihelix Transcription Factor Family AT3G14180 46.681 1.22e-99 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc241695g00006 Myb_DNA-bind_4 1.5e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241695g00006 - - adu:107464875 498.819